Gene Information

Name : Msil_3881 (Msil_3881)
Accession : YP_002364125.1
Strain : Methylocella silvestris BL2
Genome accession: NC_011666
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 4258811 - 4260334 bp
Length : 1524 bp
Strand : +
Note : PFAM: Aldehyde Dehydrogenase; KEGG: aba:Acid345_1381 aldehyde dehydrogenase (acceptor)

DNA sequence :
ATGAATGTACGAGCCAATGTTTCCGCCGCAGCGGCGGTCATTCCGGATGAGATCCGCAATTGGCTATCCGGTCCGCGGCC
AATGTTGATCGACGGCAAATGGGTCAAATCGGTCTCTGGCAAGACGTTCGACGTATTCGATCCGGCGACGGGGGAAAAGA
TCGCTTCGGTCGCGGAGGGCGACGCCGCTGACGTCGACCTCGCGGTGGCGGCTGCGCGCCGCGCGTTTGAAAGCGGCCCC
TGGTCGCGCATGACGCCCTCCGAACGCGGCCGCATTATCCATCGCATCGGCGATCTCATCCTCGACCATGCCGATGAACT
GGCCGCGATCGAATCGCTCGACAATGGCAAGCCCAAAGCTGTCGCGAAGGCCGCAGACGTTACTTTGTCAGCCGACATGT
TCCACTATATGTCTGGCTGGGCGACCAAGCTTGAGGGCAAGCATATCCCGATTTCGGCGCTGACCGCCCCGGGCATGGAA
TTCGTATCGATGACGCGGCTCGAGCCGATCGGCGTCGTGGGCCAGATCATTCCATGGAACTTCCCGCTTCTGATGGCGGC
GTGGAAGCTGGCCCCGGCCCTGACCACCGGCTGCGCGGTCGTGCTCAAGATCGCCGAGGAGACGCCGCTTTCGGCGCTGC
GACTTGGCGAGCTTCTGATCGAGGCTGGCGTTCCGGACGGCGTCGTCAATATTGTCCCGGGCTTTGGCGAAACGGCGGGG
GCGGCGCTGGCCGGCCATCCGGGAGTCGACAAGGTCGCCTTCACCGGCTCAACGGAAGTGGGCCGCCTGATCGTTCAGGC
CGCCTCGCGCGATCTCAAGAAAGTCTCGCTGGAGCTTGGCGGTAAATCGCCGAACATCGTCCTTGGCGACGCCGATCCGG
AGATGGCGATCGCCGGCGCGACCGCCGCGATCTTCTTCAATCATGGTCAGTGCTGCAACGCCGGTTCGCGGCTGTTCGTG
CAGCGCAATCTGTTCGACAAGGTCGTCGAGGGCATCGCGGCGCAGGCGGAAAAGATCAAATTGGGCCACGGCCTCAACGC
GGAAACGGAGATGGGCCCGCTGGTGTCGCGCGTCCAATATGACCGCGTCACGGGCTTGCTCGCCTCGGGCCGTCAGGAAG
GCGCCCGCGCCGTCTGCGGCGGGGAAGGGCTTGGCGGCGCCGGTTATTTCGTGCCCCCGACGGTCCTCGTCGACACAAAC
CCGGGCATGCGGGTGGTGCGCGAGGAGATCTTCGGGCCTGTGCTCGTCGCCACCCCGTTCGATGAGCCCGACGACGCGCT
GATCGCCGAAGCGAACAACACGATCTACGGCCTCGCCGCGGGCGTCTGGTCGGGCAATACCGGGCGGGCGCATCAGATCG
CCAACCGGCTGCGCGCCGGCACGGTGTGGATCAACTGCTACCATGTCTTCGACGCGGCGCTGCCCTTCGGCGGCTACAAG
CAGTCGGGATGGGGCCGCGAGATGGGACAGGCGGTTCTGTCGAACTACCTCGAGGCGAAGGCGATCACGACGCGGATCGG
CTGA

Protein sequence :
MNVRANVSAAAAVIPDEIRNWLSGPRPMLIDGKWVKSVSGKTFDVFDPATGEKIASVAEGDAADVDLAVAAARRAFESGP
WSRMTPSERGRIIHRIGDLILDHADELAAIESLDNGKPKAVAKAADVTLSADMFHYMSGWATKLEGKHIPISALTAPGME
FVSMTRLEPIGVVGQIIPWNFPLLMAAWKLAPALTTGCAVVLKIAEETPLSALRLGELLIEAGVPDGVVNIVPGFGETAG
AALAGHPGVDKVAFTGSTEVGRLIVQAASRDLKKVSLELGGKSPNIVLGDADPEMAIAGATAAIFFNHGQCCNAGSRLFV
QRNLFDKVVEGIAAQAEKIKLGHGLNAETEMGPLVSRVQYDRVTGLLASGRQEGARAVCGGEGLGGAGYFVPPTVLVDTN
PGMRVVREEIFGPVLVATPFDEPDDALIAEANNTIYGLAAGVWSGNTGRAHQIANRLRAGTVWINCYHVFDAALPFGGYK
QSGWGREMGQAVLSNYLEAKAITTRIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 4e-79 45
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-77 45
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-78 44
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-78 44
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-78 44
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-77 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Msil_3881 YP_002364125.1 aldehyde dehydrogenase VFG0082 Protein 3e-77 45