Gene Information

Name : Msil_0328 (Msil_0328)
Accession : YP_002360669.1
Strain : Methylocella silvestris BL2
Genome accession: NC_011666
Putative virulence/resistance : Resistance
Product : O-succinylhomoserine (thiol)-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 367569 - 368726 bp
Length : 1158 bp
Strand : -
Note : KEGG: nha:Nham_0684 O-succinylhomoserine (thiol)-lyase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein

DNA sequence :
ATGACGCATGAAAAAGCGCTCCAGACCATCGCGGCCTCGAACGGGGTCGCGGCGGACAGCGCCTACGGAGCGGCGGCGCC
GCCGATCTATCTTTCGAGCACCTTCGCCTTCAAGGGGTTCGAGCGGCCGGGCGGTCACGAATATACGCGAACGAGCAATC
CGACCCGCGACCTCCTGGCCGACACGCTGGCCAAGCTTGAGGGCGGCGCAGGCGCGGTGACCCTGTCAAGCGGCATGGCG
GCGATCAATCTGCTGCTCGATCCAATGGAGCGCGATGATCTCGTCATCGCGCCGCATGATTGCTATTCCGGCGTCCAAAG
GCTCTTGTCCGCCCACGCCGCAAAGGGTCATTTCAAGGTCGAGTTCGTCGATCAGAGCGATGCGGAGGCCGTCGCCACGG
CGCTCGGCCGCAATCCGAAACTTTTGATGATCGAGACCCCGAGCAACCCACTGATGCGCGTGGTCGACATCAGGGCATTT
TGCGAGGCCGCGAAAAAAGTCGGCGCGAAGGTCGCCGTCGACAATACGTTCCTCTCGCCCGCTCTGCAGCGGCCGATCCC
GCTCGGCGCGGATTTTGTCGTTCATTCGATGACAAAATTCCTCAACGGCCATTCCGACGTGGTCGGCGGCGCCGTGATCT
GCGCCAGCGAAAGCGACGCCGAGGAGATGCGCGGCTGGGCCAATATCACCGGCGTCACCGGCTCGCCGTTCGATTCCTAT
CTGACATTGCGAGGATTGCGGACGCTGTTTCCGCGCCTCGAACGCCAGCAGCGCACTGCGGAAACGATCGCGCTGTTCTT
ACAACAGCATCCTTCTGTCGAGGCGGTGCATTATCCGGGGCTCGTCTCGCATCCCTCCCATGCGCTCGCCAAGGCGCAGC
AGGCGGGCTTTGGCGCGATGCTGAGTTTTGAGGTCGCGGGCGGAATCGCGGCCGTGCGGCGGCTGGTGGAATCGGTCCGC
ATTTTCACTCTGGCGGAATCGCTCGGCGGCGTCGAAAGCCTGATCGCCCATCCAGCGACCATGACGCACGCCAGCATGGC
CCCCGAGGCGCGCGCGGCGGCGGGGATCAAGGATAATCTGCTGCGGCTCTCGGTCGGCCTCGAACATGAGGGGGATCTTG
TGTCCGATCTGGCGCAGGCGCTGAAGGCGCCCGCTTGA

Protein sequence :
MTHEKALQTIAASNGVAADSAYGAAAPPIYLSSTFAFKGFERPGGHEYTRTSNPTRDLLADTLAKLEGGAGAVTLSSGMA
AINLLLDPMERDDLVIAPHDCYSGVQRLLSAHAAKGHFKVEFVDQSDAEAVATALGRNPKLLMIETPSNPLMRVVDIRAF
CEAAKKVGAKVAVDNTFLSPALQRPIPLGADFVVHSMTKFLNGHSDVVGGAVICASESDAEEMRGWANITGVTGSPFDSY
LTLRGLRTLFPRLERQQRTAETIALFLQQHPSVEAVHYPGLVSHPSHALAKAQQAGFGAMLSFEVAGGIAAVRRLVESVR
IFTLAESLGGVESLIAHPATMTHASMAPEARAAAGIKDNLLRLSVGLEHEGDLVSDLAQALKAPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-55 43
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 7e-57 43
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-49 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Msil_0328 YP_002360669.1 O-succinylhomoserine (thiol)-lyase BAC0207 Protein 4e-56 43