Gene Information

Name : Msil_2999 (Msil_2999)
Accession : YP_002363272.1
Strain : Methylocella silvestris BL2
Genome accession: NC_011666
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 3312191 - 3314020 bp
Length : 1830 bp
Strand : -
Note : PFAM: thiamine biosynthesis protein ThiC; KEGG: bid:Bind_0063 thiamine biosynthesis protein ThiC

DNA sequence :
ATGAACATCCACGACAAGCCGAAGAGCCTTCGTCCGGAAAGCGTGACCCAAGGGCCCATGGCCGGCTCGCGCAAGATCTA
TGTGCATCCGGACGGTCGCTCCGACATCGCCGTGCCGCTGCGTGAGATCACCCTCAATCCGTCCGCAAACGAGCCGCCGG
TGCGCGTCTACGACGCCTCGGGACCCTATACGGAGTCCGAGCCCGCGATCGACCTTTCCGCCGGCTTGCCGCGCATCCGG
GACCCTTGGCTGGCGAGGCGCGCGGGGCTCGACTTCTACTCCGGCCGCCCGGTTCAGCCGGAAGACAATGGTTCGGTGTC
GCCGGACCGGCTCGCCCCGCCCTGCCCCGCCAACACCTCGCCGCGCAAGGGCCGGGACGGCGCGCTGGTGACGCAATATG
AATTCGCCCGCGCAGGCGTGATCACCGAAGAAATGATCTATGTCGCGGCCCGCGAAAACCTTGGCCGAGAGGCGGTGCTG
GAGGGCGCCGAAGCGAAAATCGCCGACGGCGAAAGTTTCGGCGCGTCGATCCCGGCCTTCATCACGCCGGAATTCGTGCG
CGACGAGATCGCCCGCGGCCGCGCCATCATCCCCGCCAACATCAACCATCCCGAACTCGAGCCGATGATCATCGGCCGCA
ATTTTCTCGTGAAGGTCAACGCCAACATCGGCAATTCGGCGGTGACGTCGTCCGTCGCCGAAGAGGTCGAAAAGATGGTG
TGGGCGATCCGCTGGGGCGCCGATACGGTGATGGATCTCTCGACGGGACGCAACATCCACAACATCCGCGACTGGATCAT
CCGCAACTCGCCAGCGCCGATCGGCACCGTGCCGATCTACCAGGCGCTGGAGAAGGTCAATGGCGATCCGACCAAACTGA
CATTCGAATTGTTCCGCGACACGCTGATCGAACAGGCCGAACAGGGCGTCGATTATTTCACGATCCACGCCGGCGTGCGG
CTCGGCTATATTCCGCTGACGGCGAAGCGGACCACGGGCATCGTCTCGCGCGGCGGCTCGATCATGGCCCGCTGGTGCCT
TGCCCATCACAAGGAAAGCTTCCTCTACGAGCGCTTCGACGAGCTCTGCGACGTCATGCGCGCCTATGACGTCTCCTTCT
CGCTCGGCGACGGCTTGCGCCCGGGCTCGATCGCCGACGCCAACGACCGCGCCCAATTCGCCGAATTGGAGACGCTCGGC
GAGCTGACCAAAATCGCCTGGGACAAGGGCTGCCAGGTGATGATCGAAGGGCCCGGCCATGTGCCGATGCACAAGATCAA
GATCAACATGGAAAAGCAGCTGAAGGAATGTCACGAGGCGCCGTTCTACACGCTCGGGCCGCTGACAACGGACATTGCGC
CAGGCTATGACCACATCACCTCCGGCATCGGCGCTGCGATGATCGGCTGGTTCGGCTGCGCGATGTTGTGTTATGTGACG
CCGAAAGAACATCTCGGCCTGCCGGACCGCGACGACGTCAAGACAGGCGTCATTACCTACCGCATCGCCGCCCATGCCGG
CGACCTCGCCAAGGGCCATCCGGCGGCGCAGCTGCGCGACGACGCGCTGTCGCGCGCGAGATTCGATTTCCGCTGGGAGG
ATCAGTTCAATCTCGGCCTCGATCCCGACACGGCGCGGCAGTTCCACGACGAGACGCTGCCGAAGGATGCGCATAAGACT
GCGCATTTCTGCTCGATGTGCGGTCCGCAATTCTGTTCGATGAAGATCACGCAGGATATTCGCGACGAGGTCGCCGCGAT
GGAACGCGAGAAGGGCATGGCCGACAAGAGCGCCGAATTCCTGGACGGCGGCGGCAAGCTTTACGTTTAA

Protein sequence :
MNIHDKPKSLRPESVTQGPMAGSRKIYVHPDGRSDIAVPLREITLNPSANEPPVRVYDASGPYTESEPAIDLSAGLPRIR
DPWLARRAGLDFYSGRPVQPEDNGSVSPDRLAPPCPANTSPRKGRDGALVTQYEFARAGVITEEMIYVAARENLGREAVL
EGAEAKIADGESFGASIPAFITPEFVRDEIARGRAIIPANINHPELEPMIIGRNFLVKVNANIGNSAVTSSVAEEVEKMV
WAIRWGADTVMDLSTGRNIHNIRDWIIRNSPAPIGTVPIYQALEKVNGDPTKLTFELFRDTLIEQAEQGVDYFTIHAGVR
LGYIPLTAKRTTGIVSRGGSIMARWCLAHHKESFLYERFDELCDVMRAYDVSFSLGDGLRPGSIADANDRAQFAELETLG
ELTKIAWDKGCQVMIEGPGHVPMHKIKINMEKQLKECHEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVT
PKEHLGLPDRDDVKTGVITYRIAAHAGDLAKGHPAAQLRDDALSRARFDFRWEDQFNLGLDPDTARQFHDETLPKDAHKT
AHFCSMCGPQFCSMKITQDIRDEVAAMEREKGMADKSAEFLDGGGKLYV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 64
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 64
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 63