Gene Information

Name : Msil_2730 (Msil_2730)
Accession : YP_002363014.1
Strain : Methylocella silvestris BL2
Genome accession: NC_011666
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 3002509 - 3003159 bp
Length : 651 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mrd:Mrad2831_5580 ABC transporter related

DNA sequence : 
ATGATCCGCCTGTCCGGCGTCACCAAAATTTACAAGACGGAAAACCATCGCAAGGTCGTCCTCGACAACGTCACCTACAC
CTTCGATACGCGCTATTCCTATGGCATCTTCGGGCCCAACGGCGCCGGAAAATCGACGCTGTTGCGTCTGATTGCTGGCA
CGGAACTGCCCAATTCTGGCCGTATCAAATGCGACGTGCGCGTGTCCTGGCCGCTTGGCTTTGCCGGCGGATTCCATTCC
GCGATGACGGGCCGCGAAAACGTCAAATTCGTCAGCCGGATCTATGGCGCGAACACGCGGCGCGTGATCGAATTCGTCGA
TTATTTTGCCGAGCTCGGCAATTATTTCGACATGCCGGTCAACACCTATTCATCCGGCATGGGCGCGCGCCTGGCGTTCG
GCCTCTCGATGGCGATGGATTTCGAGTGCTACCTCGTCGATGAACTCACGGCCGTGGGCGATGCGCGTTTCGCCTTGCGG
GCGCGACAGGCGTTTGACGAAAAGCGCGGCCGCAGCAGCATGATCATGGTGTCGCATGATATCGGCACCGTCAAAGCCTA
TTGCGAACGCGGCCTTGTGCTTCATCGCGGCAAGCTGCTCGCCTTCGGCGATCTCGACGACGCCATCGAGTTCTATCGAA
AGGTGCATTGA

Protein sequence : 
MIRLSGVTKIYKTENHRKVVLDNVTYTFDTRYSYGIFGPNGAGKSTLLRLIAGTELPNSGRIKCDVRVSWPLGFAGGFHS
AMTGRENVKFVSRIYGANTRRVIEFVDYFAELGNYFDMPVNTYSSGMGARLAFGLSMAMDFECYLVDELTAVGDARFALR
ARQAFDEKRGRSSMIMVSHDIGTVKAYCERGLVLHRGKLLAFGDLDDAIEFYRKVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 5e-48 49
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 1e-47 48
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 6e-48 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Msil_2730 YP_002363014.1 ABC transporter-like protein VFG2563 Protein 6e-50 49
Msil_2730 YP_002363014.1 ABC transporter-like protein VFG1449 Protein 4e-48 48
Msil_2730 YP_002363014.1 ABC transporter-like protein VFG0258 Protein 2e-48 45
Msil_2730 YP_002363014.1 ABC transporter-like protein VFG0696 Protein 1e-48 44