Gene Information

Name : Msil_1920 (Msil_1920)
Accession : YP_002362227.1
Strain : Methylocella silvestris BL2
Genome accession: NC_011666
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 2091883 - 2092590 bp
Length : 708 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bid:Bind_0830 ABC transporter related

DNA sequence :
ATGTCTGAGCCCGCGATTAAATTGCAGAATATACATCTGAGCCTCGGGCGCGGCGCGGCGCGCGTTCACATTCTGAAGGG
CGTTTCGCTCTCGATCGCGCGGGGCGAGAGCGTCGGCCTCGTCGGTCCCTCGGGCTCGGGCAAATCCACCCTGTTGATGG
CGCTGGCGGGTCTGGAGCGGCCGGATTCCGGCGCGATCACGATCGCCGGCGAAAGCCTTGACGCCCTCGGCGAGGACGCG
CTGGCGCGGTTTCGCGGCGCCAAGATTGGCATCGTGTTTCAATCGTTCCATCTGATCCCGACCATGACCGCGCTTGAGAA
TGTCGCCATCCCGCTGGAGCTCGCCGGCGCGCCGAACGCCTTCGCCCGCGCCGCCGATGAGCTTTTGGCGGTCGGCCTCA
AAGATAGGGTCGCGCATTATCCGGCGCAATTGTCGGGCGGCGAGCAGCAGCGCGTCGCTCTGGCTAGGGCGCTCGCCCCG
CGTCCCTCAATCCTGCTGGCCGACGAGCCGACCGGCAATCTCGACGCGGCTACGGGGGAAAGCATCATCGATCTCATTTT
CGCGCTACGGCGGGACCGGGGCGCGACGCTGGTTCTCGTCACCCATGATCTTGGCCTCGCCGCGCGATGCGACCGCACTA
TCGCTTTCGAGTCCGGGCGGATTGTGTCTGGCGCGCGGGGGACTGAGGCGGCGCAGGCTGTTTCCTAG

Protein sequence :
MSEPAIKLQNIHLSLGRGAARVHILKGVSLSIARGESVGLVGPSGSGKSTLLMALAGLERPDSGAITIAGESLDALGEDA
LARFRGAKIGIVFQSFHLIPTMTALENVAIPLELAGAPNAFARAADELLAVGLKDRVAHYPAQLSGGEQQRVALARALAP
RPSILLADEPTGNLDAATGESIIDLIFALRRDRGATLVLVTHDLGLAARCDRTIAFESGRIVSGARGTEAAQAVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-29 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-23 43
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-16 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Msil_1920 YP_002362227.1 ABC transporter-like protein NC_008702.1.4606598. Protein 6e-31 46
Msil_1920 YP_002362227.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-32 45
Msil_1920 YP_002362227.1 ABC transporter-like protein CP001581.1.gene798.p Protein 4e-29 42
Msil_1920 YP_002362227.1 ABC transporter-like protein CP001581.1.gene598.p Protein 9e-31 41
Msil_1920 YP_002362227.1 ABC transporter-like protein BAC0274 Protein 2e-17 41