Gene Information

Name : Msil_1825 (Msil_1825)
Accession : YP_002362132.1
Strain : Methylocella silvestris BL2
Genome accession: NC_011666
Putative virulence/resistance : Virulence
Product : LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 1989264 - 1989881 bp
Length : 618 bp
Strand : -
Note : PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: pzu:PHZ_c2804 response regulator

DNA sequence : 
ATGGCTGACGCCGTGGTCCATCTGATCGACGACGACGAGGCGGTGCGTCAGGCGCTCGGCTTTCTGCTCATGGCCTCGGG
CTACGCCGTGCGGGTCTATGAGTCTGCGGCGGTCTTTATCGAGGGGCTTGCCGAAGCGCAGCCGGGCTGCGTCGTCACCG
ACGTCCGCATGCCGGAGGTCGATGGGATCAAATTGCTGCGTCTCATGAAGGCCAAGCGCAGCCGGCTGCCGGTGATCGTC
ATGACCGGCCACGCCGACGTTCCGCTGGCCGTCGAGGCGATGAAGGCGGGCGCCGTCGACTTCCTCGAAAAACCGTTCGA
CGACGAGAGCCTGCTGGCGGCGATCCGCCTCGCGCTCGACCGGCAGGCGCGTGACGCCCGGATCGAAGATGAGTTCGCGA
CGATTCGGGCGCGGCTCGAACATCTCTCGCCGCGCGAGCGCGAGGTGCTGGACGGCCTCGTCGCCGGGCTGCCCAACAAG
TCCATCGCCTATGATCTGAAAATCAGTCCCCGCACGGTGGAAGTGCATCGCGCCAATGTCATGACTAAGATGGGCGCGGC
GAGCCTGTCGGACCTGGTGCGCATGGCCTTTGTGGTGCGCTCGGGATCGCCGAGTTGA

Protein sequence : 
MADAVVHLIDDDEAVRQALGFLLMASGYAVRVYESAAVFIEGLAEAQPGCVVTDVRMPEVDGIKLLRLMKAKRSRLPVIV
MTGHADVPLAVEAMKAGAVDFLEKPFDDESLLAAIRLALDRQARDARIEDEFATIRARLEHLSPREREVLDGLVAGLPNK
SIAYDLKISPRTVEVHRANVMTKMGAASLSDLVRMAFVVRSGSPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 2e-24 45
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 3e-24 45
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 3e-24 45
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 3e-24 45
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 3e-24 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Msil_1825 YP_002362132.1 LuxR family transcriptional regulator VFG0488 Protein 8e-25 45