Gene Information

Name : Sbal223_4483 (Sbal223_4483)
Accession : YP_002360299.1
Strain :
Genome accession: NC_011665
Putative virulence/resistance : Unknown
Product : integrase, catalytic region
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2738 - 4240 bp
Length : 1503 bp
Strand : +
Note : KEGG: pde:Pden_0461 integrase, catalytic region

DNA sequence :
GTGCCAGGTCGTAGAATTACAGATCAACAAATAAGGCTATTTATGTCTAAACGAAAAGATCATCCTCAAGTTACTGCTGC
GGTTAAAGCGGGCATATCTGAACGCTCTGCACGGCGTATTGAATCCGGCCAGCGACAATTAGGCCCTTCAAAACCTCGAA
ACTACCGCACTCGTACTGACCCACTAGAGCCTGTATGGGAACCTGTCGTCCTGCCGCTTCTACAACGGTCTGATACTATT
ACTCCTGTTGGGGTGTTTGACTATCTTATTGAAGAATATTCAGATGCTTTCCCTGCAAAGTTAAGACGAACCCTAGAGCG
ACGTATACAAAAATGGCGACAGATAAATGGCCGAGACAAGGAGGTTATTTTCCGCCAAGTTAAACAATTGGGTCAGTTAG
GAATTATGGATTTTACTTGGGCTGATTTCACCGTCACGATACAAGGAGTGGCTCTTAAACACAGATTATTTAACTATCGA
TTACCCGCAAGTGGTTGGAGCTACGCTGAAGTCGTATATGGTGGAGAGAGCTTTGTGGCCGTTGCTACAGGCTTACAAAA
TGCCTTCACACAATCAAATGGCGTTCCACAAGAAGTGAGAACAGATAGCTTGAGCGCCGCGTATAAAAACCATTCTAACG
AAATATGGTTTACCGAACGATTTTCTGAATTATCAATGCATTATAGCTTCAAACCTTCAAAAAATAACACCGGCATTGCC
CATGAAAATGGGGCGATTGAAAGTGCCAACAATCATCTGAAAAATCAAATACGACAAGCTTTGGCTATTCGTGATTCAAG
TGACTTTGATTGCATAGACGAATATGAAGTATTCATTGATGAGGTCGTCCAAAGACGCAACCGCCGTATTATGCCACTTC
TCATTGAGGAGCAACGACAATTACAACCTTTGCCTAAATTTGACAGTGCCAATTATGAAGTTCACCCAGTAAAAGTATCA
AGCACCAGTACTTTTCAGTTAAAACGAGTGACTTATTCAGTCCCATCTAGACTTGTTGGTGCAACATTACGCGTACATCT
TTTCGATAAGACATTGGATATCTATTGCCAGGGCGTGCACACATCAACGCTCACCCGCGTGCATACATCGGCAAATCATC
GAGGTCATCAAATTGATTACCGTCACTTAATCGGTGCGCTGATGAAAAAACCACGAGCGTTTAGGGGGTGCCAATGGCGA
GACCAACTCCTTCCAAATGAAGACTATCGTCAAATATGGAAAGGTATCGATGCCCAATTAAGTGCTGACGAAGCGAGTCT
TTATATGGTTAGGTTACTGAATATTGCCTGTAAATCAGAGCGAGAAGAGGCGGTAGGAAGATTTGTCCTTGATGGACTGA
ATAACGCTCAACTGCCAAGCATATTCGACTGTGAAGACCGTTTTTTAAAAGACGAAGAGTGGGAATACAACCCTCAAGTA
CAGCAACATAGCTTAGCGTCTTATCAGCAGCTCTTCGACGGGGAGAATGGATATGTCAGTTGA

Protein sequence :
MPGRRITDQQIRLFMSKRKDHPQVTAAVKAGISERSARRIESGQRQLGPSKPRNYRTRTDPLEPVWEPVVLPLLQRSDTI
TPVGVFDYLIEEYSDAFPAKLRRTLERRIQKWRQINGRDKEVIFRQVKQLGQLGIMDFTWADFTVTIQGVALKHRLFNYR
LPASGWSYAEVVYGGESFVAVATGLQNAFTQSNGVPQEVRTDSLSAAYKNHSNEIWFTERFSELSMHYSFKPSKNNTGIA
HENGAIESANNHLKNQIRQALAIRDSSDFDCIDEYEVFIDEVVQRRNRRIMPLLIEEQRQLQPLPKFDSANYEVHPVKVS
STSTFQLKRVTYSVPSRLVGATLRVHLFDKTLDIYCQGVHTSTLTRVHTSANHRGHQIDYRHLIGALMKKPRAFRGCQWR
DQLLPNEDYRQIWKGIDAQLSADEASLYMVRLLNIACKSEREEAVGRFVLDGLNNAQLPSIFDCEDRFLKDEEWEYNPQV
QQHSLASYQQLFDGENGYVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
r6 AAC61728.1 transposase R6 Not tested PAI I CFT073 Protein 5e-75 42
unnamed AAL67386.1 R6-like protein Not tested PAI II CFT073 Protein 5e-75 42
unnamed AAL67341.1 R6-like protein Not tested PAI II CFT073 Protein 1e-74 42
c3607 NP_755482.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-75 41
c5144 NP_756992.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-75 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal223_4483 YP_002360299.1 integrase, catalytic region VFG1728 Protein 8e-76 41