Gene Information

Name : Sbal223_0838 (Sbal223_0838)
Accession : YP_002356779.1
Strain : Shewanella baltica OS223
Genome accession: NC_011663
Putative virulence/resistance : Resistance
Product : beta-lactamase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2602
EC number : -
Position : 970321 - 971208 bp
Length : 888 bp
Strand : +
Note : PFAM: penicillin-binding protein transpeptidase; KEGG: shw:Sputw3181_0786 beta-lactamase

DNA sequence :

ATGCGTTCGTTCGCCATATCGACTGTGTTGGTGATGTCCTCACTGTTAGCGTCGTCAATCATAGCTGCCCCAACTTTTGC
CTCAACAGCGGCGAAGACGGAGTGGCAAGAAACCCGCAGTTGGGATGCCATTTTTACTCAGCACCAAGTTGAACCGCAAC
AAGCTAAGCAACAACAAGCTAAACCGCAAAAAAATAAGTCCCAACAAGCCTCGGGCGTGGTGGTGCTGTGGAACGAAAAC
AAGCAACAGGGATATACCAACAATCTCAAACGTGCCAATCAAGGTTTTTTACCGGCATCGACCTTTAAAATCCCCAATAG
CTTGATTGCGCTCGAGCTGGGTGTGGTGAAGGATGAGCATCAAGTGTTTAAATGGGATGGTAAAAGTCGTGATATCGCCA
CTTGGAATCGTGACCATAACTTGATTACCGGGATGAAGTATTCGGTTGTGCCCGTCTATCAAGAGTTTGCCCGCCAAATT
GGTGAGGCGCGAATGTCGAAGATGATCGCCTCCTTCGATTATGGCAATGAGGATATCTCGGGTAATTTAGATAGCTTTTG
GCTTGATGGTGGTATTCGGATATCGGCCACTGAGCAAATCGATTTCCTGCGTCGACTTTATCACAATAAGGTACACGCTT
CAGAGCGCAGTCAACGCATCGTTAAGCAAGCCATGCTCACCGAGGCGAACGGCGACTATATTATCCGCGCAAAAACCGGT
TATGCGGTCAGAGCTGAGCCAAGTATTGGCTGGTGGGTGGGTTGGGTAGAACTCGATGATAATGTGTGGTTTTTTGCAAT
GAATATGGATATACCCGACGCCGCAGGTTTGCCATTGCGTCAAGCCATCACTAAAGAAGTTTTAAAACTGGAACACGTTA
TTCCTTAG

Protein sequence :

MRSFAISTVLVMSSLLASSIIAAPTFASTAAKTEWQETRSWDAIFTQHQVEPQQAKQQQAKPQKNKSQQASGVVVLWNEN
KQQGYTNNLKRANQGFLPASTFKIPNSLIALELGVVKDEHQVFKWDGKSRDIATWNRDHNLITGMKYSVVPVYQEFARQI
GEARMSKMIASFDYGNEDISGNLDSFWLDGGIRISATEQIDFLRRLYHNKVHASERSQRIVKQAMLTEANGDYIIRAKTG
YAVRAEPSIGWWVGWVELDDNVWFFAMNMDIPDAAGLPLRQAITKEVLKLEHVIP

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
bla OXA-10	CAJ77047.1	Oxacillinase	Not tested	AbaR1	Protein	2e-57	50
blaOXA-129	AET25386.1	OXA-129 beta-lactamase	Not tested	PAGI-2(C)	Protein	8e-53	48
bla OXA-129	AFG30109.1	OXA-129 beta-lactamase	Not tested	PAGI-2	Protein	8e-53	48

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Sbal223_0838	YP_002356779.1	beta-lactamase	HM015773.1.gene6.p01	Protein	6e-97	77
Sbal223_0838	YP_002356779.1	beta-lactamase	HQ700343.1.gene1.p01	Protein	1e-93	76
Sbal223_0838	YP_002356779.1	beta-lactamase	JN205800.1.gene6.p01	Protein	1e-96	76
Sbal223_0838	YP_002356779.1	beta-lactamase	AY500137.1.gene1.p01	Protein	1e-96	72
Sbal223_0838	YP_002356779.1	beta-lactamase	AY343493.1.gene1.p01	Protein	4e-70	55
Sbal223_0838	YP_002356779.1	beta-lactamase	U59183.1.gene3.p01	Protein	7e-57	50
Sbal223_0838	YP_002356779.1	beta-lactamase	NC_010410.6002874.p0	Protein	1e-57	50
Sbal223_0838	YP_002356779.1	beta-lactamase	AF231133.1.gene3.p01	Protein	2e-55	50
Sbal223_0838	YP_002356779.1	beta-lactamase	AM412777.1.gene1.p01	Protein	8e-57	50
Sbal223_0838	YP_002356779.1	beta-lactamase	U37105.2.gene2.p01	Protein	1e-57	50
Sbal223_0838	YP_002356779.1	beta-lactamase	AY445080.1.gene1.p01	Protein	8e-57	50
Sbal223_0838	YP_002356779.1	beta-lactamase	X75562.1.gene1.p01	Protein	5e-55	49
Sbal223_0838	YP_002356779.1	beta-lactamase	AJ854182.1.gene1.p01	Protein	4e-57	49
Sbal223_0838	YP_002356779.1	beta-lactamase	Z22590.1.gene1.p01	Protein	6e-57	49
Sbal223_0838	YP_002356779.1	beta-lactamase	X58272.1.gene1.p01	Protein	3e-53	49
Sbal223_0838	YP_002356779.1	beta-lactamase	AM932669.1.gene2.p01	Protein	5e-53	48
Sbal223_0838	YP_002356779.1	beta-lactamase	AY619003.1.gene1.p01	Protein	4e-30	42
Sbal223_0838	YP_002356779.1	beta-lactamase	EU086834.1.gene1.p01	Protein	1e-31	42
Sbal223_0838	YP_002356779.1	beta-lactamase	AY423074.1.gene1.p01	Protein	4e-34	42
Sbal223_0838	YP_002356779.1	beta-lactamase	EU086830.1.gene1.p01	Protein	2e-31	41
Sbal223_0838	YP_002356779.1	beta-lactamase	JF273470.1.gene1.p01	Protein	3e-32	41