Gene Information

Name : alr (Sbal223_0738)
Accession : YP_002356680.1
Strain : Shewanella baltica OS223
Genome accession: NC_011663
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0787
EC number : -
Position : 877526 - 878602 bp
Length : 1077 bp
Strand : +
Note : converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer

DNA sequence :
TTGAACCCTTTTCCCCGTGCAGAAATTAGCAGTAGTGCACTGCAAACCAATCTCGCTGCGTTGCGTCAACAGGCACCAGC
GAGTCGCGTGATGGCCGTCGTTAAAGCGAACGGCTATGGTCATGGATTATTAAATGTCGCCCATTGTTTAGTCAGTGCCG
ATGGTTTTGGCTTAGCACGATTGGATGAAGCCTTAGAATTACGAGCGGGCGGCGTGACAGCGCGTTTGTTATTACTGGAA
GGTTTTTTCCGCGCCACCGATCTCCCGTTACTCGTCGGGCATGATATCGACACTGTGGTGCACCATAGCTCTCAGCTTGA
GATGTTAGAGCAAACTGTGTTGTCTAAACCTGTCACTGTTTGGCTGAAAGTGGATTCAGGTATGCATCGCTTAGGCTTTA
CGCCCGAGCAATTCTCAACGGTTTACGACCGATTAATGGCCTGTCCCAATGTGGCAAAACCGATTCATTTGATGACGCAT
TTTGCCTGTGCAGATGAGCCAGATAACACTTATACCTCAGTGCAGATGGCGGCTTTTAATTCCTTAACGGCTGGCTTACC
CGGATTTAGAACCTTAGCCAACTCCGCCGGTGCCTTGTATTGGCCGCAAAGCCAAGGCGATTGGATCCGTCCGGGAATCG
CACTCTATGGTGTGTCACCTGTCACTGGAGATTGCGGTGCGAATCACGGACTAGTACCTGCGATGGAACTGGTATCACAG
TTGATTGCGGTGCGGGATCATAAAGCCAATCAGCCTGTAGGTTATGGTTGTTTCTGGACCGCGAAGCAAGATACCCGTTT
AGGTGTCGTCGCAATTGGTTATGGTGATGGTTATCCCCGCAATGCACCGGAAGGTACACCTGTGTGGGTTAATGGTCGTC
GCGTACCCATAGTTGGCCGCGTCTCTATGGACATGTTGACTGTCGACTTAGGCCAAGATGCGCAAGATAAGGTTGGCGAC
AGTGCTTTGTTGTGGGGTAAAGCATTACCCGTTGAAGAAGTCGCTGAACATATCGGTACTATCGCTTATGAATTAGTCAC
TAAGCTCACCCCAAGGGTTGCGGTTTGTCTAGCTTAA

Protein sequence :
MNPFPRAEISSSALQTNLAALRQQAPASRVMAVVKANGYGHGLLNVAHCLVSADGFGLARLDEALELRAGGVTARLLLLE
GFFRATDLPLLVGHDIDTVVHHSSQLEMLEQTVLSKPVTVWLKVDSGMHRLGFTPEQFSTVYDRLMACPNVAKPIHLMTH
FACADEPDNTYTSVQMAAFNSLTAGLPGFRTLANSAGALYWPQSQGDWIRPGIALYGVSPVTGDCGANHGLVPAMELVSQ
LIAVRDHKANQPVGYGCFWTAKQDTRLGVVAIGYGDGYPRNAPEGTPVWVNGRRVPIVGRVSMDMLTVDLGQDAQDKVGD
SALLWGKALPVEEVAEHIGTIAYELVTKLTPRVAVCLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dadX AAC61705.1 alanine racemase Not tested PAI I CFT073 Protein 1e-57 46