Gene Information

Name : Sbal223_0564 (Sbal223_0564)
Accession : YP_002356521.1
Strain : Shewanella baltica OS223
Genome accession: NC_011663
Putative virulence/resistance : Resistance
Product : O-succinylhomoserine (thiol)-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 646840 - 648003 bp
Length : 1164 bp
Strand : +
Note : KEGG: spc:Sputcn32_0616 O-succinylhomoserine (thiol)-lyase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein

DNA sequence :
ATGGCAGAGCGTCAATTAGCCACACTGGCAGTGCGTCAGGGTATCGAAAGCGATACTCAATATGGCGCAGTTGTGCCACC
GATTTATTTGTCGACTAATTACGCCTTCGATGGTCATAAAAATCCTCGCGAATTCGATTACAGTCGTTCAGGCAACCCAA
CACGCTGTATTTTAGGCGAAGCATTAGCGCAATTAGAAAAGGGCGCCACTGGCATAGTGACCTGCACTGGCATGGCGGCC
ATCACCTTAGTGACCACTTTGCTCGGCCCCGATGATCTATTGGTGGTGCCCCACGATTGTTACGGCGGTTCTTACCGTTT
ATTTACTAACTTGGCGAAGAAAGGCCAGTTTAAGCTGATTGTGGTTGATCAAACCGACAGCCAAGCGTTAACCGCCGCTA
TCGGGCAACATCCTAAGATGGTGTGGCTCGAAACCCCATCTAACCCGCTATTGCGTGTGGTGGATATCGAGGCCATTGCC
AAGGCGAGCCATGAGGTCGGCGCGCTGGTGGTGGTCGATAACACTTTTTTATCGCCGATATTGCAACAACCCCTATTGTT
AGGCGCAGATATTGTTATCCACTCCACCACTAAATACATCAATGGCCACAGCGATGTGGTCGGCGGCGCTGTGGTTGCCA
AAGATGCACAAATTGGCGAAAGCTTACATTGGTGGTCGAACACGTTAGGCTTAACGGGGTCGGCATTTGATAGTTACTTA
ACCCTGCGCGGCCTACGTACCTTAGCGGTGCGAATTCGTGAACATCAAGCCAATGCCCAGCGCATTGTTGAGGTGTTAAC
GCAAAGCCCTGTGGTGAGCAAAGTTTATTACCCTGGTCTTGCGGATCACCCTGGTCATGCGATTGCAGCCAAGCAACAAA
AAGGCTTTGGCGCTATGCTGAGTTTTGAACTCAAGGGCGGCGAGGCCGAAGTGGTGGCCTTTTTAGGTGCACTTAGCTTA
TTTAGCGTGGCGGAAAGTTTAGGTGGCGTCGAAAGTTTAGTGGCCGTGCCCGCAACTATGACCCACAGAGCCATGGAGCC
GCAGGCGCGTTTTGAGGCAGGCATTAAAGACACCCTATTGCGTCTATCGGTGGGTATTGAAGATGCCGCCGATTTAGTTG
CAGATATTCAAGCAGGATTAGCCGCCGTTGCGGCTTGTCAGTAG

Protein sequence :
MAERQLATLAVRQGIESDTQYGAVVPPIYLSTNYAFDGHKNPREFDYSRSGNPTRCILGEALAQLEKGATGIVTCTGMAA
ITLVTTLLGPDDLLVVPHDCYGGSYRLFTNLAKKGQFKLIVVDQTDSQALTAAIGQHPKMVWLETPSNPLLRVVDIEAIA
KASHEVGALVVVDNTFLSPILQQPLLLGADIVIHSTTKYINGHSDVVGGAVVAKDAQIGESLHWWSNTLGLTGSAFDSYL
TLRGLRTLAVRIREHQANAQRIVEVLTQSPVVSKVYYPGLADHPGHAIAAKQQKGFGAMLSFELKGGEAEVVAFLGALSL
FSVAESLGGVESLVAVPATMTHRAMEPQARFEAGIKDTLLRLSVGIEDAADLVADIQAGLAAVAACQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-59 41
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-60 41
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 7e-53 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal223_0564 YP_002356521.1 O-succinylhomoserine (thiol)-lyase BAC0207 Protein 7e-53 41