Gene Information

Name : Sbal223_0478 (Sbal223_0478)
Accession : YP_002356435.1
Strain : Shewanella baltica OS223
Genome accession: NC_011663
Putative virulence/resistance : Virulence
Product : LuxR family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 544976 - 545578 bp
Length : 603 bp
Strand : -
Note : PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: shm:Shewmr7_0436 two component transcriptional regulator, LuxR family

DNA sequence : 
ATGTCTACAAAATTGCCACTGTATTTAGTTGATGACGATGAAGCGATTCTGGATTCGCTGGGTTTTATGCTCGGGCAATT
TGGCTACCAAGTGCAAACCTTCAACAGCGGCCGCGACTTCCTTGCGCACTGTGCATTATCGCAGGCAGGCTGCGTGATTT
TAGATAGCCGAATGCCGGAGATCACCGGCCAAGAAGTGCAGCAAAAACTGCTCGAAACCCACAGTCCGCTTGGCGTCATC
TTTCTCACTGGCCACGGCGACTTACCTATGGCGCTGAGCGCCTTTCGTAAGGGAGCCTGCGACTTTTTTCAAAAACCTGT
GTCCGGCAAGGCATTAGTGCAAGCGATAGAAAAGGCACAGCGTGAAAGTCAGGCGGCCTTCGAGCAGCAAAGTCTGCAAC
ATAAGTTTGACCAACTGACCGAGCGCGAACAACAAGTGTTAGCCCATGTGATCCAAGGCATGACCAATAAGCAAATCTCG
GAAGCCATGTTTTTATCCCTGCGCACGATTGAAGTACACCGCGCAAAAATCATGAAGAAACTCGAAGTAAATAATATGGC
AGAGCTAGTGCAGCACTTAGGACATTTGCATTCTGTTTTATAA

Protein sequence : 
MSTKLPLYLVDDDEAILDSLGFMLGQFGYQVQTFNSGRDFLAHCALSQAGCVILDSRMPEITGQEVQQKLLETHSPLGVI
FLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAQRESQAAFEQQSLQHKFDQLTEREQQVLAHVIQGMTNKQIS
EAMFLSLRTIEVHRAKIMKKLEVNNMAELVQHLGHLHSVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 8e-36 44
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 8e-36 44
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 8e-36 44
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 6e-36 44
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 7e-36 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal223_0478 YP_002356435.1 LuxR family two component transcriptional regulator VFG0488 Protein 2e-36 44