Gene Information

Name : Sbal223_4273 (Sbal223_4273)
Accession : YP_002360162.1
Strain : Shewanella baltica OS223
Genome accession: NC_011663
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 5077712 - 5078875 bp
Length : 1164 bp
Strand : +
Note : TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: shw:Sputw3181_0063 UDP-glucose/GDP-mannose dehydrogenase

DNA sequence : 
ATGAAAATTGTTGTTGTTGGGATGGGCTATGTGGGCCTATCAAATGCCGTCTTATTGGCGCAGCAAAACCAAGTCACTGC
AATTGATTTAGTTCCTGAACGTGTCAAGCAAGTTAACGAGCGTAAATCCACTGTGGTCGATGAATTAATCGAAGACTATC
TGCAAAACAAACCGTTGAATTTAACTGCAACAACGGAAAATGTTGCCTTTCAATCGGCTGACTTTGTGATTATTGCGACT
CCAACAGACTACGATCCTCAGACTAATTATTTTAATACCCATTCGGTTGAAAGCGTCATTCGTGATGTACTCGCTACTAA
TCCTGATACGACGATTATCATCAAATCGACTGTCCCCGTCGGTTATACAGCAGCATTAAGGCACAAGTTTAAGAGCGACA
ACATACTCTTTTCTCCAGAGTTTTTACGCGAAGGTAAAGCCTTGTATGACAACCTTTATCCCTCACGGATTGTAGTCGGT
GAACGCTCGGCGCGTGCCCAAGTCTTTGCAAACCTTTTAGCCAAGGCGGCAATCAAGCAAGATATTCCTATTTTGCTGAC
CGATAGCACCGAAGCCGAAGCGATTAAGTTATTTGCTAATACATTTCTCGCCATGCGGGTCGCCTACTTTAACGAGCTCG
ATACCTATGCAGAGAGTCGAGGATTAAATACTCGCCAGATTATTGAGGGGGTTAGCCTCGATCCGCGTATTGGTGATTAT
TACAACAATCCTTCTTTTGGCTATGGCGGGTACTGTCTTCCGAAAGACACTAAGCAATTACTGGCTAACTACAATGATGT
CCCAAACAATTTAATCAGTGCCATTGTCGACTCAAACACCACACGCAAAGACTTTATCGCCGACGCTATTATCCGTAAGC
AGCCAAAATGTGTAGGAATTTATCGTTTGATCATGAAAGCCGATTCAGACAATTTCCGCGCCTCAGCAGTGCAAGGCGTG
ATGAAGCGCATTAAAGCGAAAGGCATTGAAGTCGTCGTGTTTGAGCCTGTACTTAAAGAAGATTACTTTTTCAAATCTCG
CGTGATGAGAGACTTAACTGAATTTAAGTCAATGTGTGATGTGATCGTCTCCAACCGTATGGTTGATGAACTCAATGATG
TTGCGGATAAAGTCTATACCCGAGATCTATTTCACCATGATTAA

Protein sequence : 
MKIVVVGMGYVGLSNAVLLAQQNQVTAIDLVPERVKQVNERKSTVVDELIEDYLQNKPLNLTATTENVAFQSADFVIIAT
PTDYDPQTNYFNTHSVESVIRDVLATNPDTTIIIKSTVPVGYTAALRHKFKSDNILFSPEFLREGKALYDNLYPSRIVVG
ERSARAQVFANLLAKAAIKQDIPILLTDSTEAEAIKLFANTFLAMRVAYFNELDTYAESRGLNTRQIIEGVSLDPRIGDY
YNNPSFGYGGYCLPKDTKQLLANYNDVPNNLISAIVDSNTTRKDFIADAIIRKQPKCVGIYRLIMKADSDNFRASAVQGV
MKRIKAKGIEVVVFEPVLKEDYFFKSRVMRDLTEFKSMCDVIVSNRMVDELNDVADKVYTRDLFHHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 4e-92 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal223_4273 YP_002360162.1 nucleotide sugar dehydrogenase VFG0963 Protein 6e-101 55