|
Name : Sbal223_4261 (Sbal223_4261) Accession : YP_002360150.1 Strain : Shewanella baltica OS223 Genome accession: NC_011663 Putative virulence/resistance : Virulence Product : Fis family two component sigma54 specific transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 5065556 - 5066938 bp Length : 1383 bp Strand : - Note : PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: shw:Sputw3181_0075 two component, sigma54 specific, tra DNA sequence : ATGAGCCAGATAGATAATAACCTCAAGCCTCTTCCATCGGCAGTATCGGTACTGATTGTTGATGATGAACCCGGAATGCG CAGTTTTTTAAATAAGGCACTCTCGAAGAAATTCGCCTTAGTCGAAACAGCGGGCAGTATCGAAGATGCGGAGCAGCTAC GTAGCCGCTGCCATTTCGATTTGCTGATCGTCGACATTCGCCTCCCTGGGCGCTCAGGTATCGAATGGCATGAAGCGTTG GATGAGCAGGGTCGTCGTTCGGACATCATTTTTATGACCGGCTATGCCGACATGGAAGTGGCGATTACTGCGCTGCGCGC GGGTGCATCTGACTTCATCATGAAACCTTTCCACCTTGAGCAGATGATGACAGCGGTCGATCGCTGTATCGAACGTCGCC TGCTTAAACGTGAAAACTTGATGCTGCGCCGTGAGGTTTCAATCGGTTACTCATCGACCATTATTGGCAGCAGTGAGGCC ATGAAGTCGGTGAAACATATTATCGAACGTGTGGCGCCGACCAATGCGGTTGTGCTGATCCAAGGTGAGTCTGGCACGGG TAAGGAATTAGTTGCACGCCAACTACATTTACTCAGTGGACGTCAGGGACCTTTTGTCCCAGTTAACTGTGGCTCTATCG CCCCTGAATTACTTGAAAGTGAACTGTTTGGTCATACCGCTGGCGCATTTACGGGCGCCAAAGGTAATCGAGAAGGTTTA TTCAGTTTTGCCTCGGGCGGGACGATTTTCCTCGATGAAATTGGCGAAATGCCACTGAAAATGCAAACGGCATTGCTCAG AGTATTAGAGCAAAAAGCGATTCGCCCAGTGGGCAGCGAGAAAGAAGTGAACATCGATGTGCGAGTGATCGCGGCCACCA ATCGTACTTTGATTGATGAAGTGGATGCGGGGAATTTCCGCCGTGACTTATATTATCGACTGAATGTGCTCGATATTTTA ATCCCGCCATTACGTGACAGACCCGAAGATGTGGTCGAGTTAACCCATCACTTCACTCGTCAACTCGCCGCCGAATTAGG GGTTAGAGAAGTAGTGTGGAGCCATGAGGACATGGTGAAGTTGCAACAACACGAGTGGCCGGGCAATATTCGTGAGCTGC GCAATATGATTGAGCGCTGTATTTTGCTGGGCAAACCGCCGGCGGAATATTGGAAACAACAGCTGAAGAGTGAGTCTTTA TCGACATCGGGTTATCCATTGGATTGGCCATTAAAAGAAGTCGAAAAACACCATGTGACCAGCGTTGTGGACTTACATTC TGGCAATAAGTCTGCCGCGGCGAGGGATTTAGGCGTTTCGCGTAAAACTTTAGATCGTAAGTATAAAGAGTGGTTTGATT TCAGCGGCGATCAGGAGTCATAG Protein sequence : MSQIDNNLKPLPSAVSVLIVDDEPGMRSFLNKALSKKFALVETAGSIEDAEQLRSRCHFDLLIVDIRLPGRSGIEWHEAL DEQGRRSDIIFMTGYADMEVAITALRAGASDFIMKPFHLEQMMTAVDRCIERRLLKRENLMLRREVSIGYSSTIIGSSEA MKSVKHIIERVAPTNAVVLIQGESGTGKELVARQLHLLSGRQGPFVPVNCGSIAPELLESELFGHTAGAFTGAKGNREGL FSFASGGTIFLDEIGEMPLKMQTALLRVLEQKAIRPVGSEKEVNIDVRVIAATNRTLIDEVDAGNFRRDLYYRLNVLDIL IPPLRDRPEDVVELTHHFTRQLAAELGVREVVWSHEDMVKLQQHEWPGNIRELRNMIERCILLGKPPAEYWKQQLKSESL STSGYPLDWPLKEVEKHHVTSVVDLHSGNKSAAARDLGVSRKTLDRKYKEWFDFSGDQES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 4e-62 | 41 |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 4e-62 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sbal223_4261 | YP_002360150.1 | Fis family two component sigma54 specific transcriptional regulator | BAC0089 | Protein | 2e-67 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sbal223_4261 | YP_002360150.1 | Fis family two component sigma54 specific transcriptional regulator | VFG1214 | Protein | 1e-67 | 42 |
