|
Name : Sbal223_4130 (Sbal223_4130) Accession : YP_002360024.1 Strain : Shewanella baltica OS223 Genome accession: NC_011663 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 4900020 - 4902383 bp Length : 2364 bp Strand : - Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: shw:Sputw3181_0109 RNA binding S1 domain protein DNA sequence : ATGCAAACTAATGCACATAACATCGCTCAGATTATCGCTCAAGAACTGAATGTTCGTGAGCAACAAGTTGCCGCAACCAT CACTCTGCTTGACGATGGTGCGACAGTTCCCTTCGTTGCCCGTTATCGTAAAGAAGCCACGGGCGGATTAGACGATACGC AACTGCGTACCTTGTACACACGTTTAGGTTACCTGCGTGAGCTGAACGACAGACGCCAAGTGATCCTGTCTAGCATCCAA GCTCAGGGTAAGTTAACGCCAGAATTACAAAGGGCTATTGACGACGCAGACAGCAAAACACGTCTCGAAGATTTATATCT GCCCTTCAAACCTAAGCGCCGCACTAAGGGCCAAATCGCTATCGAAGCTGGGCTTGAACCATTAGCCGATGCCTTACTGG CTGACCGTAGCGCCGATGTTGAAGCCAAAGCGGCGGGTTATATCAATAGCGACGCGGGTTTTGTCGATGTGAAAGCTGTG CTTGAAGGCGCGCGTTATATTCTGATGGAGCGCTACGCCGAAGACGCGGAATTACTGCGTAAAGTTCGTGAACATTTAAG CCAAAACAGTGTGTTAGAAAGCCGCTTAATTGCAGGCAAAGAGAAAGAAGGCGCGAAATTCCGTGATTATTTCGAGCATA CCGAACAGTTAGCGAAGATCCCTTCTCACCGTGCGCTGGCGATGCTGCGTGGTCGTAACGAAGGTTTCTTAGCGTTATCT ATGAATGCCGATCCTGCTGCTGAGGCCGGTCAAGGTAGTTATTGCGAAGTGATTATCAGTGATCACTTAGGGCTGAAACT GGGCGATAGCAGCGTCGATCAATGGTTGAAAACTGTAGTGACGGCGACATGGCGCATTAAGATTGCGCTACAGATGGAAA CCGAGTTTATTTCGCAAATGCGCGAACGCGCCGAAGCCGAGGCCATTAAAGTTTTCGCCCGTAACTTAGGTGATTTATTG ATGGCCGCTCCAGCGGGCGCGAAAGCGACCATGGGACTCGATCCAGGTTTACGTACTGGCGTGAAAGTGGCGGTGGTCGA TAACACGGGTAAGATGTTGTGCCATGCGACGATTTTCCCGCACGCACCGCAAAATCTGTGGGAAAAGTCGATTCGTACTT TGGCGAACTTAGTCAAAATGCACAAAGTTGAATTAATTGCGATTGGTAACGGCACGGCATCACGGGAAACCGATAAGCTG GCCGCTGAGCTGATTGCTGCAGTGAAAGATACCCATCCACAGTTGACCAAAGTGATGGTCAGTGAAGCGGGCGCGTCTGT ATATTCAGCATCGGAATTAGCGGCGCTGGAGTTTCCTGATCTCGATGTCTCGATTCGTGGCGCTGTGTCTATCGCGCGTC GTTTGCAAGATCCGTTAGCCGAACTGGTGAAGATTGAGCCTAAGTCTATCGGTGTGGGCCAATACCAACACGACGTGAGC CAAAGCCAATTATCGGGTTCGCTGGAAGCCGTGGTGGAAGACTGTGTAAACGGTGTGGGTGTGGATCTCAACATGGCCTC TGCGCCTTTGTTGTCGCAAGTGGCGGGTTTAAACAAGACGTTAGCGAAAAATGTAGTTGATTACCGCGATGCCAATGGTC AGTTTAAGAATCGTAAAGAGTTGCTGAAAGTGCCACGTTTAGGGCCTAAAGCCTATGAGCAAGCGGCGGGCTTTTTGCGT ATTCGTGAAGGTGACAATCCACTCGATGCCTCGTCTGTGCATCCAGAGGCTTATTCGTTAGTGGAAACTATCGCTAAGAC TAAGCAAGTGGAGCTGGCGAGCCTGATGGGTAACTCAGATCTACTGCGCAGCATCAAACCTGAAGAGTTCATTACGGCGG AGTTTGGTTTACCTACTGTGACGGATATTTTAGCCGAGCTGGATAAGCCTGGTCGCGATCCCCGTGGAGAGTTCAAAACC GCCAAGTTTAAAGATGGCGTGGAAGAACTTAAACACTTGAAACCTGAAATGGTGCTCGAAGGTGTGGTGACCAACGTGAC TAATTTTGGTGCCTTCGTCGATATTGGCGTGCATCAAGATGGACTGGTTCATATCTCTTCACTGACCGACAAGTTTATTA GCGATCCCCACACAATCGTGAAAGCGGGTGATGTGGTCAAAGTTAAAGTGATGGAAGTTGACGTTGAGCGTCGTCGTATC GGTTTGAGCATGCGTTTGGATGAAGCTATCGATCAAAGTAAATCGCAGCAAAGACCACATAATCCTGCCAGAACTCATAA TGGTAAGGCACCACAGTCGACGAAACCTGCTGCACGTCCTGCGCAAAAGCAAGCACCTAAAGCACCTGCGAACGCGGCCA TGGGCAATGCCTTTGCCGATGCCTTCGCTAAGCTGAAAAAGTAA Protein sequence : MQTNAHNIAQIIAQELNVREQQVAATITLLDDGATVPFVARYRKEATGGLDDTQLRTLYTRLGYLRELNDRRQVILSSIQ AQGKLTPELQRAIDDADSKTRLEDLYLPFKPKRRTKGQIAIEAGLEPLADALLADRSADVEAKAAGYINSDAGFVDVKAV LEGARYILMERYAEDAELLRKVREHLSQNSVLESRLIAGKEKEGAKFRDYFEHTEQLAKIPSHRALAMLRGRNEGFLALS MNADPAAEAGQGSYCEVIISDHLGLKLGDSSVDQWLKTVVTATWRIKIALQMETEFISQMRERAEAEAIKVFARNLGDLL MAAPAGAKATMGLDPGLRTGVKVAVVDNTGKMLCHATIFPHAPQNLWEKSIRTLANLVKMHKVELIAIGNGTASRETDKL AAELIAAVKDTHPQLTKVMVSEAGASVYSASELAALEFPDLDVSIRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVS QSQLSGSLEAVVEDCVNGVGVDLNMASAPLLSQVAGLNKTLAKNVVDYRDANGQFKNRKELLKVPRLGPKAYEQAAGFLR IREGDNPLDASSVHPEAYSLVETIAKTKQVELASLMGNSDLLRSIKPEEFITAEFGLPTVTDILAELDKPGRDPRGEFKT AKFKDGVEELKHLKPEMVLEGVVTNVTNFGAFVDIGVHQDGLVHISSLTDKFISDPHTIVKAGDVVKVKVMEVDVERRRI GLSMRLDEAIDQSKSQQRPHNPARTHNGKAPQSTKPAARPAQKQAPKAPANAAMGNAFADAFAKLKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 59 |
