Gene Information

Name : Sbal223_0381 (Sbal223_0381)
Accession : YP_002356338.1
Strain : Shewanella baltica OS223
Genome accession: NC_011663
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 425948 - 426148 bp
Length : 201 bp
Strand : +
Note : PFAM: Prophage CP4-57 regulatory; KEGG: spl:Spea_1260 phage transcriptional regulator, AlpA

DNA sequence :
ATGAAACTAATTAAACTAAAAGACGTTATCGCATCTACAGGCTTAGGGCGTTCGACCATTTACAAATATATTGAAAACGG
TATATTTCCAAAAGCAGTATCACTTGGATGCCGTTCAGTTGCTTGGGTAGAGAGTGAAATACAAGATTGGATATTAGCGA
GGATTGAAGAGCGGGACTTACAAAATGAAAAAGCTTGCTAA

Protein sequence :
MKLIKLKDVIASTGLGRSTIYKYIENGIFPKAVSLGCRSVAWVESEIQDWILARIEERDLQNEKAC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 8e-14 56
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 3e-11 51
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 4e-11 51
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 4e-11 51
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 6e-14 48
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 7e-14 48
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 6e-14 48
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 8e-09 47
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 2e-10 46
unnamed CAA21398.1 - Not tested HPI Protein 2e-10 46
unnamed CAD33739.1 hypothetical protein Not tested PAI I 536 Protein 1e-05 42
c5192 NP_757040.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-05 42
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 3e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal223_0381 YP_002356338.1 phage transcriptional regulator AlpA VFG1118 Protein 1e-11 51
Sbal223_0381 YP_002356338.1 phage transcriptional regulator AlpA VFG1141 Protein 2e-14 48
Sbal223_0381 YP_002356338.1 phage transcriptional regulator AlpA VFG1480 Protein 4e-06 42