Gene Information

Name : Sbal223_3675 (Sbal223_3675)
Accession : YP_002359576.1
Strain : Shewanella baltica OS223
Genome accession: NC_011663
Putative virulence/resistance : Virulence
Product : LuxR family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 4361467 - 4362087 bp
Length : 621 bp
Strand : -
Note : PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: shw:Sputw3181_3508 response regulator receiver protein

DNA sequence : 
ATGAGTATTGAGTTACCTGTGTATTTAATCGATGACGATGACTCAGTGCGTCGTTCTTTGCGTTTTATGCTCGAAAGTTA
TGGCCTCAAGATCACTGACTTTGATAGCGCCGAAGCCTTTTTTACCGCAGTTGACTTAACCCTGCCGGGTTGTGCGCTGG
TTGATGTGCGTATGCCAGGCTTGAGCGGCCCGCAGTTGCATCTTGAATTAGTCGCCAAAAATAGTCCGTTAGCTGTGATT
TATCTCACCGGCCATGGCGATGTGCCCATGGCGGTTGAAGCACTTAAACTCGGTGCGGTGGATTTTTTCCAAAAGCCCGC
CGATGGCGCTAAGTTAGCCGAAGCGGTCGTCAAAGCACTGGAACATACCAAGGCACATCATCAAGACAATCAGTATCTTG
AGACGTATCAAGCGCTCACACCAAGGGAGAGGGAAATACTCAACCTGATTGCCCAAGGGCTGAAGAACCAAGAGATCGCC
GATAGCCTCTGTATTGCCATGCGTACGGTCGAGATCCACCGCGCCAATTTGATGAAAGGCATGCAAGTGGGATCGCTGGC
GGAAATGATGCTGATCTATAGCCGGATCGCCGATCGCCTGCGCCTTGAAGATAACCGCTAA

Protein sequence : 
MSIELPVYLIDDDDSVRRSLRFMLESYGLKITDFDSAEAFFTAVDLTLPGCALVDVRMPGLSGPQLHLELVAKNSPLAVI
YLTGHGDVPMAVEALKLGAVDFFQKPADGAKLAEAVVKALEHTKAHHQDNQYLETYQALTPREREILNLIAQGLKNQEIA
DSLCIAMRTVEIHRANLMKGMQVGSLAEMMLIYSRIADRLRLEDNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 5e-33 45
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 5e-33 45
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 5e-33 45
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 3e-33 45
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 5e-33 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal223_3675 YP_002359576.1 LuxR family two component transcriptional regulator VFG0488 Protein 2e-33 45