Gene Information

Name : Sbal223_3449 (Sbal223_3449)
Accession : YP_002359356.1
Strain : Shewanella baltica OS223
Genome accession: NC_011663
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 4097988 - 4098890 bp
Length : 903 bp
Strand : -
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: shw:Sputw3181_3283 tyrosine recombinase XerD

DNA sequence :
GTGCCTAAGACATACCAGCCCGATCCGCTCATTGATGTTTTTCTTGATGATCTTTGGTCGAGCAAGGGACTGAGTGACAA
CACCTTATCGGCCTATCGCACCGATTTGCGCCATTTTGATCGTTATCAAGGTCAGCAAGGGGTAACGCTGCTCGCGGTTT
CTCAGGCCGATGTCAGAGCGTATTTAGCCTTTAGAGTTGAGCAGGATTTTGCGCGCACCAGTAGCGCTCGGCTGCTCAGT
AGTTTACGGCGTTTCTATACCTATTTAGTGCAGACCAAGCAGATTTTAGCCGATCCTATGGCCCTAGTTGAGTCGCCTAA
ATTAACCCGCCATTTACCCGATTCATTGAGTGAATCGCAGGTCGATCGCTTGTTGTCTGAGCCCAATGTGGAAGATGCGG
TCGAATGTCGTGACAAAGCCATGCTAGAGCTGTTGTATGCGACAGGCTTGAGGGTGAGCGAGCTCGTTGGCTTGACTATG
GAGCAGATGAGCCTGCGCCAAGGTTTAGTGCGCATTGTGGGTAAGGGTGGTAAAGAGCGTCTCGTGCCGCTGGGTGAATT
AGCGATTACAGAGGTTGAGAACTACATGAAGTTTGCGCGGCAAGAGTTGCTTGGCAATAAACAATCCGATGTGGTGTTTC
CGTCAAAACGCGGGCAGATGATGACGCGGCAAACCTTTTGGCATCGGATTAAGCTGTATGCCCTGCGTGCTGGGATTGAA
ACCGCATTATCACCGCACACATTACGCCATGCTTTTGCTACCCATTTGCTCAATCACGGTGCCGATCTGCGGGTGGTGCA
ATTGCTGTTAGGCCATAGCGACCTGTCGACCACGCAGATTTATACCCATGTGGCGCGGGCAAGATTGCAGGAATTGCATC
AACAGCATCATCCAAGAGGCTGA

Protein sequence :
MPKTYQPDPLIDVFLDDLWSSKGLSDNTLSAYRTDLRHFDRYQGQQGVTLLAVSQADVRAYLAFRVEQDFARTSSARLLS
SLRRFYTYLVQTKQILADPMALVESPKLTRHLPDSLSESQVDRLLSEPNVEDAVECRDKAMLELLYATGLRVSELVGLTM
EQMSLRQGLVRIVGKGGKERLVPLGELAITEVENYMKFARQELLGNKQSDVVFPSKRGQMMTRQTFWHRIKLYALRAGIE
TALSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVARARLQELHQQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-55 57
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-55 57