Gene Information

Name : Sbal223_3202 (Sbal223_3202)
Accession : YP_002359110.1
Strain : Shewanella baltica OS223
Genome accession: NC_011663
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3795600 - 3797096 bp
Length : 1497 bp
Strand : -
Note : PFAM: Aldehyde Dehydrogenase; KEGG: shw:Sputw3181_3079 aldehyde dehydrogenase (NAD(+))

DNA sequence :
ATGAGCACACCGAAGAAACGCAGCGAATGGGAAAGTCTTGCTGCCAGCCTGTCTATTAATGGGAAGGCGTTTATCAATGG
CGAATACCAAGATGCCGTTTCGGGTAACACCTTTGATTGTATTAGCCCTATCGATGGCCGCTTGCTGGTAAAAGTGGCGA
GTTGCGATCTTGCGGATGCCAATCTTGCGGTTGCCAATGGCCGCAGCGTATTCGATTCCGGTGTTTGGTCGCAGCAGTCT
CCGGTAAAGCGCAAACAAGTGATGATACGTTTCGCCGAATTACTCGAAGAAAATGCCAACGAACTCGCATTGTTAGAAAC
CCTCGACATGGGTAAACCTATTCGTTTCTCTAAAGCAGTGGATGTGGCGGGAGCTGCCCGTGCGATTCGCTGGTCTGGCG
AAGCGATTGATAAAATTTACGATGAACTCGCACCAACCGCTCACAATGAAATAGGCATGATCACCCGTGAACCAGTCGGT
GTTGTCGCTGCGATTGTGCCGTGGAACTTCCCTATGCTGATGGCGTGTTGGAAGCTCGGGCCTGCACTTGCCACGGGTAA
CAGTGTGGTATTAAAACCCTCTGAAAAGTCACCCTTAACGGCTATCCGCATGGCGCAACTCGCCATTGAAGCTGGGATCC
CACAAGGCGTATTAAACGTGTTGCCAGGATTTGGCCATACCGTAGGTAAAGCCTTAGCATTGCATATGGATGTGGATACG
CTGGTGTTCACAGGTTCGACAAAAATTGCCAAGCAATTAATGATTTACGCTGGCGAGTCGAACATGAAACGCGTGTGGTT
AGAGGCCGGAGGCAAGAGCCCCAATATCGTCTTTAATGACGCGCCAGATCTGAAAGCCGCTGCCGTTGCTGCGGCCGAAG
CCATTGCCTTTAACCAAGGTGAAGTTTGCACCGCAGGTTCGCGTTTGCTGGTGGAATCAGGGGTGAAAGATGAGCTTATC
GCGCTTATCGCAGAGGAGTTAGCCTCATGGCATCCGGGTCATCCACTCGACCCTGCCACTGTGAGCGGCGCCGTTGTCGA
TAAACAACAGTTAGACACAGTACTCAGTTACATTAAAGCAGGTAAAGATGAAGGTGCGACCTTAGTCCACGGTGGCAGCC
AAGTCATGGCCGATACGGGCGGTGTATATGTGCAGCCAACGGTATTTTCTAACGTAAACAACCAAATGAAAATTGCCAGT
GAAGAAATCTTTGGCCCTGTGCTATCTGTTATTGAATTCAATGGCATGGAAGAAGCGATATTAATTGCCAACGATACCAT
CTACGGTTTAGCCGCTGGCGTGTGGACAGCGGATATCAGCAAGGCCCATAAAACCGCTAAAGCCTTGCGCGCTGGCATGG
TGTGGATCAACCATTACGATGGCGGCGACATGACAGCGCCGTTCGGTGGCTATAAACAGTCAGGTAATGGCCGAGATAAA
TCTCTGCATTCCTTCGACAAATACACAGAACTGAAAGCGACTTGGATCGTGCTATAA

Protein sequence :
MSTPKKRSEWESLAASLSINGKAFINGEYQDAVSGNTFDCISPIDGRLLVKVASCDLADANLAVANGRSVFDSGVWSQQS
PVKRKQVMIRFAELLEENANELALLETLDMGKPIRFSKAVDVAGAARAIRWSGEAIDKIYDELAPTAHNEIGMITREPVG
VVAAIVPWNFPMLMACWKLGPALATGNSVVLKPSEKSPLTAIRMAQLAIEAGIPQGVLNVLPGFGHTVGKALALHMDVDT
LVFTGSTKIAKQLMIYAGESNMKRVWLEAGGKSPNIVFNDAPDLKAAAVAAAEAIAFNQGEVCTAGSRLLVESGVKDELI
ALIAEELASWHPGHPLDPATVSGAVVDKQQLDTVLSYIKAGKDEGATLVHGGSQVMADTGGVYVQPTVFSNVNNQMKIAS
EEIFGPVLSVIEFNGMEEAILIANDTIYGLAAGVWTADISKAHKTAKALRAGMVWINHYDGGDMTAPFGGYKQSGNGRDK
SLHSFDKYTELKATWIVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-121 57
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-71 42
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-72 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-72 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-72 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-72 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal223_3202 YP_002359110.1 aldehyde dehydrogenase VFG0082 Protein 5e-72 42