Gene Information

Name : Sbal223_3036 (Sbal223_3036)
Accession : YP_002358944.1
Strain : Shewanella baltica OS223
Genome accession: NC_011663
Putative virulence/resistance : Virulence
Product : betaine aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3596238 - 3597701 bp
Length : 1464 bp
Strand : -
Note : catalyzes the formation of betaine from betaine aldehyde

DNA sequence :
ATGTCAGTAGAAGTACAGTACAACTTTATAGCGGGTCAGTTGCTCGCTAACGATAGCGGCGAAACCTTCGACGTCGTCAA
TCCTGCCACTGGGCAATTGGCGTACCGAGTGCAAGTGGCCGATGAAAAAATTCAGCAAGCGGCCATTGAGAGCGCCAAAA
AAGGCTTTGCGATTTGGTCTGCCATGAGTGCCACTGAACGCAGTCGTATTCTGTTAAACGCGGTTGCGTTATTGCGCGAT
CGTAATGATGAACTCGCGGCAATCGAAGTGCGTGACACAGGTAAACCTTGGCAAGAAGCCTCAGTGGTTGATGTGGTCAC
AGGCGCAGATGCCATTGAGTTTTTCGCCCATATTGCCCCTGGGCTTGAAGGCGCACAGCAGCAAGTCGGTGGAGATTTTT
ATTACACCCGTCGTGAGCCCTTAGGCATTTGTGCTGGCATTGGCGCGTGGAATTACCCATTACAAATCGCCTGTTGGAAG
GCCGCTCCTGCCTTAGCCAGCGGCAATGTGATGATTTTTAAACCTTCGGAAGAAACGCCGCTTGGCGCACTGAAATTAGC
GCAACTCTTAAGTGAGGCGGGTTTGCCCGATGGCGTATTTAACGTCGTGATGGGCGATGGCAAGGTTGGCGCTTGGTTAA
CGGGACATCCGGATATTGCCAAAGTGTCTTTCACTGGTGAAGTCGGTACTGGCAAAAAAGTCATGGCCGCGGCGGCAAGT
TCATTAAAAGACGTCACTATGGAACTCGGCGGTAAATCACCGCTTATCGTGTTTGACGATGCTGATATCGACAATGCGGT
TTCAGGTGCCATGCTCGGTAACTTCTACACCCAAGGTGAAGTCTGCACCAATGGGACGCGAGTGTTTGTCCATGAGTCGG
TTTATCAAGACTTTATTGAGAAGCTGCTCGCCCGTACCCAAGCCAATATTGTGGTGGGCGATCCTATGGCGCCAGAGACT
AACTTTGGCGCGTTGATTTCTAAAGATCATCAGCAAAAAGTGCTCGATTATATTCAGCAAGGTATCGATGACGGCGCAAC
TCTGCTCACTGGTGGCACAGCGTTAACGCCTGAAAACGCTCCCAATGGTTACTTTGTCGCCCCAACCATTTTTACCGATT
GCACCGACGAGATGCGTATTTGCCAAGAGGAAATCTTTGGCCCTGTGATGTCGGTACTCACCTTTAAAGATGAAGCCGAA
GTGATTGCTCGGGCAAACAATACCGCCATGGGCTTAGCTGCTGGGGTGTTCACCCAAGATATCAGCCGTGCACATCGGGT
TATTCATCAGTTACAAGCGGGTATTTGCTGGATCAATGCCTATGGTGCATCGCCAGCAGAAATGCCTGTAGGTGGGTATA
AGTTGTCGGGTATTGGCCGTGAAAACGGTAGCGAGACACTCAAGCATTACACCCAAGTTAAAGCCGTTTACGTGGGTCTA
CAGCCCTTAGAAAGCCCATTTTAA

Protein sequence :
MSVEVQYNFIAGQLLANDSGETFDVVNPATGQLAYRVQVADEKIQQAAIESAKKGFAIWSAMSATERSRILLNAVALLRD
RNDELAAIEVRDTGKPWQEASVVDVVTGADAIEFFAHIAPGLEGAQQQVGGDFYYTRREPLGICAGIGAWNYPLQIACWK
AAPALASGNVMIFKPSEETPLGALKLAQLLSEAGLPDGVFNVVMGDGKVGAWLTGHPDIAKVSFTGEVGTGKKVMAAAAS
SLKDVTMELGGKSPLIVFDDADIDNAVSGAMLGNFYTQGEVCTNGTRVFVHESVYQDFIEKLLARTQANIVVGDPMAPET
NFGALISKDHQQKVLDYIQQGIDDGATLLTGGTALTPENAPNGYFVAPTIFTDCTDEMRICQEEIFGPVMSVLTFKDEAE
VIARANNTAMGLAAGVFTQDISRAHRVIHQLQAGICWINAYGASPAEMPVGGYKLSGIGRENGSETLKHYTQVKAVYVGL
QPLESPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-72 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-74 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-74 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-74 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-74 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal223_3036 YP_002358944.1 betaine aldehyde dehydrogenase VFG0082 Protein 1e-72 41