Gene Information

Name : rdgC (Sbal223_2983)
Accession : YP_002358892.1
Strain : Shewanella baltica OS223
Genome accession: NC_011663
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 3521801 - 3522715 bp
Length : 915 bp
Strand : +
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGTGGTTTAAAAATCTTACTCTTTATCGTTTCAATAAACCTTTTGCCGTCGAAACCGAAGCGCTAGAAACTGCGTTGGC
CGATTTCACCTTCTCTCCGTGCTCAAGCCAAGATGTCAGTAAATTTGGTTTTTCCAATGCGCTAGGCAAGAAAGGCAGCT
CCTTGGTACACAGTGCCGACAATCGCCATCTGATCTGTGTAACTAAAGAAGAGAAAATTCTCCCAGGCCAAGTCATCAAA
GAAGCCTTAGAAGAAAAAGTCGCCCTCATTGAAGATGAAGAAAATCGTAAGATGGCGAAAAAAGAAAAAGATGCGCTAAA
AGATGAAATCATTACTAGCCTACTGCCACGCGCTTTTTCACGCCGCAGCCAAACCCATGCTTTGATTTTACCAGAGCTGG
AAATGATCCTTGTCGACAGTTCAAGTGCCACTAAAGCCGAAGAGCTGTTAGCTTTATTACGTAAAGCGCTCGGTAGTTTG
CCGGTGATCCCATTGAGCTTTAAAGCGCCAGTCGAATCCAATTTAACCGAATGGTTAAAACTTGGCAGCGCGCCATTACC
TTTTGAAATGCAAGATGAAGCTGAACTTAAATCCGAAGCAGATGAAGGCGGCATTGTACGTTTCAAGCAACAGGATTTAA
AAGAAGACGAAGTCTTAGCTCACCTCGCAACAGGCAAGCAAGTCCACAAGTTAGCACTGCATTTCGGCCAGTCGATTGCA
CTATTATTGCAATCGGATGCCAGCGTTAAACGCCTTAAATTCTCAGAAGAATTTAGAGCGGGTAACGATGAAGTGGGCAC
TGATGACCCTATGGCACGTTTAGATGCCGACTTTGCCTTAATGGGCAGCGAGTTAGTCGCCTTGATGCATGCACTCGTGG
CAGCACTAGGTGGACTCGAAGAAGCACAAGTTTAA

Protein sequence :
MWFKNLTLYRFNKPFAVETEALETALADFTFSPCSSQDVSKFGFSNALGKKGSSLVHSADNRHLICVTKEEKILPGQVIK
EALEEKVALIEDEENRKMAKKEKDALKDEIITSLLPRAFSRRSQTHALILPELEMILVDSSSATKAEELLALLRKALGSL
PVIPLSFKAPVESNLTEWLKLGSAPLPFEMQDEAELKSEADEGGIVRFKQQDLKEDEVLAHLATGKQVHKLALHFGQSIA
LLLQSDASVKRLKFSEEFRAGNDEVGTDDPMARLDADFALMGSELVALMHALVAALGGLEEAQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 2e-48 44