Gene Information

Name : Sbal223_2732 (Sbal223_2732)
Accession : YP_002358643.1
Strain : Shewanella baltica OS223
Genome accession: NC_011663
Putative virulence/resistance : Resistance
Product : methionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 3207210 - 3208403 bp
Length : 1194 bp
Strand : -
Note : KEGG: shw:Sputw3181_2594 methionine gamma-lyase; TIGRFAM: methionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase

DNA sequence :
ATGCAAGATGAGTCAGGCAAGATGTGGAAAGCGGCAACACAGGTTATTCATGGCGGTCATGAGCGTGAGGCCTTTGGCGC
CTTAGTGACGCCGCTATATCAAAGTGCGACTTTTGTGTTTGAGTCCGCACAGCAAGGTGGTGAGCGATTTGCGGGTAATG
AGCCGGGGTATATTTACACGCGCTTAGGTAATCCGACAACCGCCGAGCTTGAACGTAAAATGGCGATTTTAGAAGGGGCA
GAGGCCGCCGCTGCAACCGCATCTGGTATGGGCGCAGTATCCGCCGCATTACTGGCTAACTTGCAGATGGGCGATCACTT
AGTGGCATCCAATGCCGTATACGGTTGTACTTATGCGCTAATGACGACTCAGTTCGCTCGCTTTGGTATTGAAGTGTCCC
TAGTGGACTTTTCATCGGTAGCAGAAATAGAAGCGGCGATTAAATCCAATACTAAGGTCATTTTCTGTGAAACCCCAGTG
AATCCCCATTTACAGGTGTTTGATTTGGCAGCAATTGCGACTATTGCCAAACGTCATCAGTTGGTCAGTATTGTCGATAA
CACTTTTATGACGCCATTACTGCAGAGACCGCTGGATTTTGGTATCGATTTGGTGATCCACAGTGCGACTAAATATCTGA
ATGGTCATGGCGATGTGATTGCGGGGATAGTGTGTGGCAGCGAAGAACTGCTCCATAAAGTGAAGTATGAAATCTTAAAA
GATATTGGCGCTGTGATATCGCCACATGATGCTTGGCTGATCTTGCGCGGCCTTAAAACCTTAGATGTACGTTTACAGCG
CCATTGCGATAGTGCCCAGCGAGTGGCCGAGTTTTTGGCCGAACATCCCAGTATTAACCGCGTGTATTATCCCGGACTTG
CCTCTCACCCAGGGCATAAATTTATTGGTCAGCAGATGAAACGTGCCGGCGGGGTGATCGCGTTTGAACTGGCGGCAAAT
TTAGAAGAGGCCATGGCCTTTGTGGGGCATTTAAGCTTGTTCTCTATTGCGGTGAGCCTAGGCGATGCAGAATCCCTCAT
TCAACATCCAGCGTCGATGACGCACTCTCCCTATACGCCAGAGGCGAGAGCGGCGGCTGGCATTGGTGATAATCTGCTGC
GAATTTCCATTGGCTTAGAAGATTGTGACGACATTATCGCCGACCTGAATCAAGCACTCGCGCGTTTGGCATAA

Protein sequence :
MQDESGKMWKAATQVIHGGHEREAFGALVTPLYQSATFVFESAQQGGERFAGNEPGYIYTRLGNPTTAELERKMAILEGA
EAAAATASGMGAVSAALLANLQMGDHLVASNAVYGCTYALMTTQFARFGIEVSLVDFSSVAEIEAAIKSNTKVIFCETPV
NPHLQVFDLAAIATIAKRHQLVSIVDNTFMTPLLQRPLDFGIDLVIHSATKYLNGHGDVIAGIVCGSEELLHKVKYEILK
DIGAVISPHDAWLILRGLKTLDVRLQRHCDSAQRVAEFLAEHPSINRVYYPGLASHPGHKFIGQQMKRAGGVIAFELAAN
LEEAMAFVGHLSLFSIAVSLGDAESLIQHPASMTHSPYTPEARAAAGIGDNLLRISIGLEDCDDIIADLNQALARLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-64 43
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 7e-63 42
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 7e-59 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal223_2732 YP_002358643.1 methionine gamma-lyase BAC0207 Protein 2e-83 52