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Name : araD (Sbal223_2139) Accession : YP_002358065.1 Strain : Shewanella baltica OS223 Genome accession: NC_011663 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0235 EC number : - Position : 2541615 - 2542322 bp Length : 708 bp Strand : + Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source DNA sequence : ATGTCATTTCTTGAACTGAAACGCGAAGTTTATGAAGCCAATATGGAGCTTGAGAAGCGCAATTTAGTGACTTACACCTT TGGTAATGTGTCGCAAGTTGATCGCAGGCTCGGTGTAATTGGCATTAAACCGAGCGGTGTGCCCTATGAGGATCTCAAGG TCGAAGATATCGTTATTGTCGATCTTGAAAACCAAATTATCGAAGGGCGTTTACGTCCGTCATCCGACACCAAAACGCAC ACTTATTTATACCGTCAATGGCAGAGTATTGGCGGCATCACCCACACACATTCGACTTATGCAACTGCATGGGCGCAGGC GCAAATCGCCATTCCTTGTTTGGGTACCACACAAGCCGATTATGTTTACGGCGAGATCCCATGCACTGCTGTGATGCGTG ATGACCAAATCAGTCGCGATTACGAAGAAGAAACGGGCGTACAAATTCTCGATTGCTTTGTTGATAGAAATCCAGGCGAG TCACCTATGGTAATCGTTGCGGGGCATGCGCCATTCACTTGGGGAGACAGCGCGGCAAAGTCGGTTTATCACGCTGTATT ACTCGAAGAAATCGCGCGAATGGCTTATCTGACCAAAACCTTGTCGCCAAGTATCAAGCCATTAAAACAAGAGCTTATTG ATAAACATTACTTACGTAAGCACGGTAAAGACGCCTATTACGGCCAAAACAGTGTCACTAGTAAATAG Protein sequence : MSFLELKREVYEANMELEKRNLVTYTFGNVSQVDRRLGVIGIKPSGVPYEDLKVEDIVIVDLENQIIEGRLRPSSDTKTH TYLYRQWQSIGGITHTHSTYATAWAQAQIAIPCLGTTQADYVYGEIPCTAVMRDDQISRDYEEETGVQILDCFVDRNPGE SPMVIVAGHAPFTWGDSAAKSVYHAVLLEEIARMAYLTKTLSPSIKPLKQELIDKHYLRKHGKDAYYGQNSVTSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 3e-52 | 49 |
