Gene Information

Name : Sbal223_1984 (Sbal223_1984)
Accession : YP_002357911.1
Strain : Shewanella baltica OS223
Genome accession: NC_011663
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : -
Position : 2344092 - 2344829 bp
Length : 738 bp
Strand : -
Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS

DNA sequence :
ATGAATGTGACTCTGTTAATCCCGGCTCGTTACGGTTCAAGCCGCTTCCCGGGCAAACCCTTAGCCCCGATTAACGGCAA
GCCAATGATCCAACACGTGTATGAACGCGCGTCGTTAGCCAAAGGCCTCACCAATATTTATGTCGCTACCGATGATGACC
GCATTAAAGCGGCCGTTGAAGGTTTTGGCGGCAAAGTGGTCATGACCAGCCCAGAAGCGGCATCGGGTACAGATCGTATC
AATGATGCGATAAACCAACTGGGACTGAAAGATGACGACTTAGTGATCAACCTACAGGGCGATCAACCCCTTATTGACCC
AACATCCATCGAGCAAGTCATCAGCCTCTTCGAGCGTCACCCAGGTGAGTTTGAAATGGCCACCTTAGGCTTTGAAATCG
TGAATAAAGCCGAGCTTGACGATCCTATGCATGTGAAGATGGTGTTCGATAACAACAACTATGCCTTGTATTTCTCTCGT
TCGCGTATTCCTTTTGGCCGCGACACCCAAGATTACCCCGTTTATAAGCACTTAGGTGTGTATGCTTATACCCGCAAATT
TGTCCAAGCCTTCGCCGCCCTACCATTAGGACGTCTAGAAGATCTAGAAAAACTCGAGCAATTACGCGCATTAGAATATG
GTCATAAAATCAAAATCGCCATTAGCGCCTTTGATTCTATTGAAGTTGATACGCCAGAAGACATTCGTAAATGTGAGCAA
CGTTTAGCGGTTGATTAA

Protein sequence :
MNVTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDDRIKAAVEGFGGKVVMTSPEAASGTDRI
NDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGFEIVNKAELDDPMHVKMVFDNNNYALYFSR
SRIPFGRDTQDYPVYKHLGVYAYTRKFVQAFAALPLGRLEDLEKLEQLRALEYGHKIKIAISAFDSIEVDTPEDIRKCEQ
RLAVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 8e-42 42
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 6e-42 42
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 6e-42 42