Gene Information

Name : Sbal223_1623 (Sbal223_1623)
Accession : YP_002357551.1
Strain : Shewanella baltica OS223
Genome accession: NC_011663
Putative virulence/resistance : Unknown
Product : DNA topoisomerase III
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0550
EC number : -
Position : 1902066 - 1904183 bp
Length : 2118 bp
Strand : +
Note : decatenates replicating daughter chromosomes

DNA sequence :
ATGATCCTCTATATCGCAGAAAAACCTAGCCTAGGGCGAGCCATTGCCGATGTATTGCCTAAACCCCATAAAAAAGGCGA
TGGATTTATCGAAGCCGCCAATGGCGATTGCGTGTCTTGGTGTGTCGGTCACTTGCTCGAACAAGCAGAACCTGATGCCT
ATAATCCCGAATTTAAGTCGTGGAAATTCGAGCACTTGCCAATAGTGCCGGACAAGTGGCAACTAAAACCTAAGGCCGCA
ACTCGCAGCCAACTCACAGTGCTGAAACGATTAGTCAAACAAGCTAACACGCTGGTTAATGCAGGCGATCCCGATCGTGA
AGGGCAATTACTCGTGGATGAAGTGATTGCCTATCTTGGCGTGACGGGTGATAAATTACATCAAACTCAGCGTTTACTGA
TCAGCGACTTAAACCCACAAGCCGTAAAACGGGCGCTAACGCAGCTACGCAGTAATCGCGAGTTTATTCCTTTGTCCACA
TCGGCCTTAGCCCGTAGCCGCGCCGATTGGCTCTACGGCATGAATATGACCCGCGCGTACACTATCCAAGGTAAAAAGGT
TGGTTATCAAGGCGTATTGTCCGTCGGGCGAGTGCAAACGCCTTTACTCGGGCTAGTGGTGCGCCGTGATGAAGAGATTG
CCAATTTTCAATCTAAACCTTTCTATGAAGTGCTAGCGCATTTGGCGACCGAAAAGCAGGAAGCCTTCAGTGCTAAGTGG
CAACCCAGCGAAGCTTGTCAGCCGTATATGGACGAAGAAGGGCGAGTACTAGCCAGAGGGTTAGCGCAAAATGTGGTGAG
TCGCATCAGTGATAAACCTGCCTTAGTGACTCAATTAGTGGCTAAGGACAAGAAACAGAATCCGCCTTTGCCCTACAGCT
TATCCGCGCTTCAAATTGATGCGGCGAAACGGTTTGGCATGAGTGCTAAGGACGTGCTCGATACTTGCCAGAGTTTGTAT
GAGCGCCATAAACTCATTACCTATCCCCGCTCTGACAGCCGTTATTTGCCCGTCGAGCAACATAGCCTAGCGCCGTCGGT
TCTTAAGGCGATTAGCGGTGGTGCCGCTGAGTTACTGCAAGGCGCCGATGCCCCCGATCCACGGCTTAAATCCAAGGCAT
GGGATGATAAAAAAGTGGATGCCCACCACGCCATTGTTCCAACCGAGAAAACGGCTAACTTATCCAGCTTAAGTCAGCGT
GAGAGGCAGTTATATCTTCATGTTGCCCGCCAATACTTAGCCCAGTTTTATCCGGCCTATTGTTACAGTGAAACCACAGT
ACAAGTGACAATTGAGGGCGGCTTATTTAATACCAAGGCGCGTCAGGATAAATCTCTTGGCTGGAAGCAGCTCTTTGCCC
GCCAAGAGCCAAATGGCAGTAAGGCGAGTGGTAACAAGTCGACGGAAGAAAGCGCGGGTAAGGATGATGAGGAGAATGAC
GAGTTTATCGGCCAATTACCGCCTCTGAAACTAGGTCAGGCTTTGCATTGTACTCGAGGCGAGTTACTGGAGAAAAATAC
TCAGCCGCCAAAGGCCTTTACCGATGCCACTTTACTTGGTGCTATGACGGGGATTAGCCGTTACGTAACCGACCCTGAGA
TCCGTAAAATTCTTAAAGAAACCGATGGCTTAGGTACTGAAGCCACCCGTGCAGGCATTATTGAATTACTGTTTAAACGC
GGTTTTTTACAACGCTTAGGTAAATCTATCGTTTCGACGGATGTGGGTAAGGGATTAATTAACAGCTTACCCGCGAGTGC
AACAACGCCTGACATGACAGCCCTTTGGGAAGCCAGCTTGAACGGTATTTGTCATAAAGAAACCTCCTATCAAGCCTTTA
TGCAACCGCTGCTCGGCACTTTATCCACGCTTATTCAAAACGCAGGAGCACAACTGCCTACCGCGCTTAATGGCTTAAAA
GGCCAAGTTTATCGCAAAACGGCTGGGAATAAATCCGGTTATCGCAAGTCGCCTTACCGCAAAGCCTCTAGCTCGACAAA
ACGCACTGGCACGGCAAGTACCGCTAAAACAAGTACAACGACAAGTAGCAGTGCGAAAAAGTCGAGTGCGAGTTCAGGGA
CTCGGAGTCGAACACGCAAAGTGGCTGCTGAGGTTTGA

Protein sequence :
MILYIAEKPSLGRAIADVLPKPHKKGDGFIEAANGDCVSWCVGHLLEQAEPDAYNPEFKSWKFEHLPIVPDKWQLKPKAA
TRSQLTVLKRLVKQANTLVNAGDPDREGQLLVDEVIAYLGVTGDKLHQTQRLLISDLNPQAVKRALTQLRSNREFIPLST
SALARSRADWLYGMNMTRAYTIQGKKVGYQGVLSVGRVQTPLLGLVVRRDEEIANFQSKPFYEVLAHLATEKQEAFSAKW
QPSEACQPYMDEEGRVLARGLAQNVVSRISDKPALVTQLVAKDKKQNPPLPYSLSALQIDAAKRFGMSAKDVLDTCQSLY
ERHKLITYPRSDSRYLPVEQHSLAPSVLKAISGGAAELLQGADAPDPRLKSKAWDDKKVDAHHAIVPTEKTANLSSLSQR
ERQLYLHVARQYLAQFYPAYCYSETTVQVTIEGGLFNTKARQDKSLGWKQLFARQEPNGSKASGNKSTEESAGKDDEEND
EFIGQLPPLKLGQALHCTRGELLEKNTQPPKAFTDATLLGAMTGISRYVTDPEIRKILKETDGLGTEATRAGIIELLFKR
GFLQRLGKSIVSTDVGKGLINSLPASATTPDMTALWEASLNGICHKETSYQAFMQPLLGTLSTLIQNAGAQLPTALNGLK
GQVYRKTAGNKSGYRKSPYRKASSSTKRTGTASTAKTSTTTSSSAKKSSASSGTRSRTRKVAAEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
topB NP_458624.1 topoisomerase B Not tested SPI-7 Protein 2e-109 41
topB NP_807836.1 DNA topoisomerase III Not tested SPI-7 Protein 2e-109 41
topB AAF14809.1 topoisomerase B Not tested SPI-7 Protein 2e-109 41