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Name : Sbal223_1548 (Sbal223_1548) Accession : YP_002357476.1 Strain : Shewanella baltica OS223 Genome accession: NC_011663 Putative virulence/resistance : Virulence Product : Fis family two component sigma54 specific transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 1809243 - 1810622 bp Length : 1380 bp Strand : - Note : PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: shw:Sputw3181_1504 two component, sigma54 specific, tra DNA sequence : ATGAGTGTGCCCAATTCCATCCAAGATTATTCTGTTCTCATCATCGACGATGAGCCACACATAGGCACAGTTCTCGTTCA GCTATTTGAACTTGAGGGCATTAAGGCGCTCGCCACCACAGAGCCTAAAGGGATCGCTAAGCACCTGCATAAGGATTGGG CGGGAATGGTGATATCAGATGTCAACATGCCGCAATTAGATGGCATCAGCTTAATGCAACAAATCCGCCTGCAGGACCCC GACCTCCCCGTTGTGTTATTGACAGGTTTTGGGGATATCGCCATGGCAGTCAATGCCCTAAAGCAAGGCGCCTACGACTT TCTCGAAAAGCCCTTCAATAACGAGCATATACTCGATGTGGTCAAGCGCGCCTTAGATAAACGCAGCCTGACCCTAGAGA ACCGTAAGCTTAAAAAGGATCTCGAAAGCCAGAGCGTACCGGGCCCTCGCATTTTGGGTAACAGCGTCGGCATCAACCGC ATGCGCCACATCATAGATCAAGTGATAGATACCCCCGCTGACGTGTTAATCGAAGGTGAAACAGGCACAGGAAAAGAACT CGTCGCCCGCTATTTACACGATCACAGCAGCCGCAGCCAAGCCAACTTTGTCGCCATCAACTGTGGGGCGATCCCCGAAA ACTTAATTGAAAGTGAGCTCTTTGGCGCCGAAGCAGGTGCCTTTACCGGCGTCGATAAGATGCGCATTGGTAAGTTTGAA TACGCCAACGGCGGTACATTATTTTTAGATGAAATTGAAAGTACACCACTGTCGCTGCAAGTAAAACTGCTGCGGGTACT TGAAGATCGTAAAGTTGAACGCTTAGGGTCAAACAAAAGCATCAGCCTTGATATACGGGTAATCGCCGCCACTAAGGTGG ATTTAAAGAGCCTGTGTGACACGGGGGAATTTCGCCAAGACTTGTTGTATCGCTTAAATCTGGTGACAGTGCCTATCCCT CCCCTGCGGGATCGCCGTGAAGATATTCCTTTGCTGTTCCTGCACTTTGCCCGCGTCGCATCGGCACGTTATCACAAAGC GCTTATTGCCTTAAATGCCGAGCAAAACGCCATTCTCACTTCCCACGACTGGCCGGGTAATGTGCGTGAGTTACGTAATC TTGCCGAACGCTTTGTACTGCTCGGCGGAGAAGCCGCCTTTGCTGGCACTTTGGGCAACACCCCAAGCCTGCACTCGAGT ATGTCCTTGCTGCAACGAGTCGAGTTTTTTGAACGGGTACTGATTGAAGAAGCGCTCAGCCACAACAAGGGCAGCATTAA GCAAACGATGGAGCAGCTGGAACTGCCCCGTAAAACCCTCTACGACAAAATGCGAAAATACGATTTAGACCGCAAGCAAT ACATTAACTCCGATGACTAG Protein sequence : MSVPNSIQDYSVLIIDDEPHIGTVLVQLFELEGIKALATTEPKGIAKHLHKDWAGMVISDVNMPQLDGISLMQQIRLQDP DLPVVLLTGFGDIAMAVNALKQGAYDFLEKPFNNEHILDVVKRALDKRSLTLENRKLKKDLESQSVPGPRILGNSVGINR MRHIIDQVIDTPADVLIEGETGTGKELVARYLHDHSSRSQANFVAINCGAIPENLIESELFGAEAGAFTGVDKMRIGKFE YANGGTLFLDEIESTPLSLQVKLLRVLEDRKVERLGSNKSISLDIRVIAATKVDLKSLCDTGEFRQDLLYRLNLVTVPIP PLRDRREDIPLLFLHFARVASARYHKALIALNAEQNAILTSHDWPGNVRELRNLAERFVLLGGEAAFAGTLGNTPSLHSS MSLLQRVEFFERVLIEEALSHNKGSIKQTMEQLELPRKTLYDKMRKYDLDRKQYINSDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | NP_791207.1 | type III transcriptional regulator HrpS | Virulence | Hrp PAI | Protein | 1e-52 | 41 |
| hrpS | AAC34753.1 | HrpS | Virulence | Hrp PAI | Protein | 2e-50 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sbal223_1548 | YP_002357476.1 | Fis family two component sigma54 specific transcriptional regulator | VFG1249 | Protein | 7e-63 | 42 |
