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Name : Sbal223_0153 (Sbal223_0153) Accession : YP_002356117.1 Strain : Shewanella baltica OS223 Genome accession: NC_011663 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 177207 - 179327 bp Length : 2121 bp Strand : + Note : TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: shw:Sputw3181_3704 general secretion pathway protein D DNA sequence : ATGAATAACAAAAGGATTCGACGCAAGCTGATTGCAGGGATTGTTGCGGGTGCAGCCATGTTCTCCTCCCAATTCGCTTG GTCTGAACAGTATGCGGCCAACTTTAAGGGCACGGATATTCAAGAGTTTATCAACATAGTTGGTAAAAACTTGAACAAGA CCATCATAGTCGACCCGACGATCCGCGGTAAAATCAACGTTCGCAGTTATGATCTGCTTAACGATGAACAGTATTACCAG TTTTTCCTCAACGTCTTACAAGTCTACGGTTATGCCATCGTCGAGATGGAAAATAACGTTATCAAAGTCATCAAAGACAA AGACGCCAAAACCGCAGCAATCCGAGTGGCTAATGATGCCGAACCTGGGATAGGCGATGAGATGGTCACGCGTATCGTGG CGCTGTATAACACTGAGGCTAAGCAATTAGCTCCGCTGTTACGCCAATTAAATGATAACGCGGGTGGCGGTAACGTAGTG AACTACGATCCCTCCAACGTCTTGATGTTGTCTGGTCGCGCTGCTGTGGTGAACAAGTTAGTTGAAATTGTTCGCCGCGT AGATAAACAGGGCGACACCTCAGTACAAGTGGTGCCGTTAGAGTTCGCCTCCGCCGGTGAAATGGTACGAATTATCGATA CCCTTTATCGCGCCACGGCTAACCAATCTCAAATGCCTGGCCAAGCGCCGAAAGTGGTTGCTGACGAACGTATCAACGCT GTGGTTGTTAGCGGCGACGAAAAGAGCCGCCAACGTGTGGTCGAGCTCATTCATCGTCTCGATGCCGAGCAAGCTAGTAC AGGCAACACTAAGGTGCGTTACTTACGTTATGCCAAAGCAGAAGATTTAGTTGAAGTGCTGACAGGTTTTGCCCAGAAAT TAGAGGGCGAAAAAGATCCAAGTGCTCAAGCTGCAGGTGGTAAACGCCGCAATGAAATCAATATTATGGCCCATGCTGAG ACTAACGCTTTAGTGATCAGTGCCGAACCCGATCAAATGCGGACTATCGAGAGCGTGATTAATCAGCTCGATATTCGCCG TGCTCAAGTGTTAGTTGAAGCGATTATCGTGGAAGTGGCTGAGGGCGATAACGTTGGCTTCGGGGTCCAATGGGCGGCTA AAGCGGGTGGTGGGACTCAGTTTAATAACTTAGGCCCAACCATAGGTGAGATTGGCGCTGGTGTATGGCAGGCACAGGGG GAAAAAGGCTCATCAATCACAACGCTTGACCCTGAAGGAAAGCCCGTAGTGACCACCAACCCAGATAAGCGCGGAGATGT AACGCTACTTGCCCAAGCATTAGGCAAAGTGAACGGTATGGCTTGGGGCGTGGCCATGGGTGACTTTGGCGCGCTGATCC AAGCCGTGTCGAGTGACACTAACTCAAACGTACTGGCGACACCGTCAATTACCACCTTAGATAACCAAGAAGCGTCTTTC ATCGTCGGTGATGAAGTGCCTATTCTGACGGGCTCTACCGCCAGTTCGAGCAACAGCAACCCATTCCAAACCGTTGAACG TAAAGAGGTTGGGGTTAAGCTGAAAGTGGTGCCGCAGATCAACGAAGGTAATGCGGTTAAGCTGACGATTGAACAGGAAG TGTCAGGAGTTAACGGTAACACAGGTGTGGATATTTCCTTTGCTACTCGCCGTTTAACGACCACTGTTATGGCTGACTCA GGTCAAATCGTGGTTCTGGGTGGTTTGATCAACGAAGAAGTACAAGAAAGCATACAAAAAGTACCATTCTTGGGTGATAT CCCCATCATTGGCCACTTATTTAAATCTTCTTCGAGCAAAAAGACCAAGAAAAACCTGATGATCTTCATCAAACCAACCA TTATCCGTGATGGCATCACAATGGAAGGGATTGCTGGTCGTAAATATAACTATTTCAGAGCATTACAACTTGAGCAGCAA GAACGTGGCGTCAACTTAATGCCAAATACGAAAGTGCCTGTGTTGGAAGAATGGAATCAATCAGAGTATTTACCGCCAGA AGTTAACGCCATTTTAGAGCGTTATAAAGAAGGTAAAGGTTTAGATGCCCAGATGCGCCAAACGGATCCGACCTTAAAGT CACTGGAAGAAAACAAGAATAAAGATAAAACCAATGAGTGA Protein sequence : MNNKRIRRKLIAGIVAGAAMFSSQFAWSEQYAANFKGTDIQEFINIVGKNLNKTIIVDPTIRGKINVRSYDLLNDEQYYQ FFLNVLQVYGYAIVEMENNVIKVIKDKDAKTAAIRVANDAEPGIGDEMVTRIVALYNTEAKQLAPLLRQLNDNAGGGNVV NYDPSNVLMLSGRAAVVNKLVEIVRRVDKQGDTSVQVVPLEFASAGEMVRIIDTLYRATANQSQMPGQAPKVVADERINA VVVSGDEKSRQRVVELIHRLDAEQASTGNTKVRYLRYAKAEDLVEVLTGFAQKLEGEKDPSAQAAGGKRRNEINIMAHAE TNALVISAEPDQMRTIESVINQLDIRRAQVLVEAIIVEVAEGDNVGFGVQWAAKAGGGTQFNNLGPTIGEIGAGVWQAQG EKGSSITTLDPEGKPVVTTNPDKRGDVTLLAQALGKVNGMAWGVAMGDFGALIQAVSSDTNSNVLATPSITTLDNQEASF IVGDEVPILTGSTASSSNSNPFQTVERKEVGVKLKVVPQINEGNAVKLTIEQEVSGVNGNTGVDISFATRRLTTTVMADS GQIVVLGGLINEEVQESIQKVPFLGDIPIIGHLFKSSSSKKTKKNLMIFIKPTIIRDGITMEGIAGRKYNYFRALQLEQQ ERGVNLMPNTKVPVLEEWNQSEYLPPEVNAILERYKEGKGLDAQMRQTDPTLKSLEENKNKDKTNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-147 | 52 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 5e-155 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sbal223_0153 | YP_002356117.1 | general secretion pathway protein D | VFG2047 | Protein | 7e-146 | 52 |
