Gene Information

Name : Sbal223_1246 (Sbal223_1246)
Accession : YP_002357179.1
Strain : Shewanella baltica OS223
Genome accession: NC_011663
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 1471516 - 1474086 bp
Length : 2571 bp
Strand : -
Note : This protein performs the mismatch recognition step during the DNA repair process

DNA sequence :
ATGAATGTAATTGATACCGATGATTTAGAAAAACATACTCCTATGATGCGTCAGTACTTGACCATGAAAGCAGAACATCA
CGACATGTTGCTGTTTTATCGCATGGGTGACTTCTACGAGTTGTTTTATGACGATGCTAAACGTGCTTCTGAGCTGTTAG
GCATTTCACTCACGGCGCGCGGTAAAAGTGGTGGCGATCCTATCCCCATGGCGGGACTGCCTTACCATGCTGTGGAAGGC
TATCTTGCGAAATTAGTTCAAATTGGTCAATCGGTTGCGATATGTGAACAAATTGGCGACCCAGCAACCTCTAAAGGGCC
TGTTGAGCGTAAAGTGGTGCGTATCGTCACGCCTGGCACCTTAACCGACGAAGCCCTGCTGCAGGAACGCCAAGACAATC
TATTGGCAGCGGTTTATCAAGGTAAAATCGGTTTTGGTTATGCCACTCTGGATGTTTCATCCGGGCGTTTTGTGATTGCC
GAGCTCGACACGCGAGAGTCATTAGAAGCTGAATTGCAACGCACTAATCCCGTTGAAATTCTCTACAGTGAAGACTTTGG
TGAACTAGGTCTACTAAACGGTTTTAAAGGTAAACGTCGTCGCCCTGAATGGGAATTTGATTACGACACTAGCATCAAGT
TACTGCTAGCTCAGTTTGGCACGAAAGACTTGCATGGTTTTGGTATCGCAGATGCACGTTTATCACTGCAGGCTGCGGGT
TGCTTGATGCAATATGTCAAAGACACACAGCGCACAGCCCTGCCCCATATCAATGCCATTACCCGCTTTAATCAAACCGA
TAGCATAGTGCTCGATGCGGCAACGCGCCGAAATCTAGAACTCACTCAAAACCTTGCCGGTGGTCGCGATAATACCTTAG
CCGCAGTATTGGATAACACGGCGACGCCTATGGGCAGCCGCATGTTGCAACGCTGGATCCATCAGCCGCTGCGAGATCCA
AAACACATCAAAGCACGCCAACAGGCGGTGACTGAACTACTCGATACCGCCGCCCACGAAGGTTTGCATGAACAGTTAAA
AGCACTTGGCGATATCGAACGTATCATGGCAAGACTCGCGCTGCGTACCGCTCGCCCAAGAGACTTTGCCCGTTTACGTC
AAGCGCTGGGCTTACTACCTGAATTACAACAGAGTTTAAGCACACTGAGCGCGCCGCACACGACTCAATTACGGCAACAC
TTAGGTGAGTTCCCCGCTGAACAAGCCTTACTTGAGCGCGCGATAGTCGATAATCCTCCCATGCTTATCCGCGATGGCGG
AGTGATCCGTGAAGGCTATAACAGCGAATTAGATGAATGGCGCGGCCTTAGCGAAGGTGCGAGCGATTACTTAGTACAAC
TCGAAGCCAGAGAAAAAGAACGTACTGGTATCAACACACTTAAAGTCGGCTATAACCGTGTACACGGCTATTACATCGAA
GTGAGTCGCTTGCAATCCTCGCAAGTGCCACTCAATTACCAACGACGTCAAACCCTTAAGAATATGGAGCGTTATATCAC
GCCCGAACTTAAGGAGTACGAAGAAAAAGTGCTCTCGAGCCAAGGTAAAGCACTGGCACTCGAAAAGCAGTTATGGGAAC
AATTATTTGATCTTATTCTGCCAAAATTACATGAATTACAAGCTTTTGCTCGAGCGGCGGCAGAACTTGATGTGTTAAGT
AACTTTGCTGAGCGCGCCGAAACCTTAGGCTACACTTGCCCAGAGCTGAGCCAAGATATCGGCGTACAGATAGAGGCTGG
TCGTCACCCAGTGGTGGAACGTGTGAGTCAAACACCGTTTATCGCTAACCCAGTCACCTTGCACAATCAAAGACGTATGT
TGATTGTCACCGGACCTAACATGGGCGGTAAATCGACTTACATGCGCCAAGTCGCCTTGATCACGCTGATGGCCCACATT
GGCTGTTTTGTGCCAGCAGATTGCGCACTGATAGGCCCTATCGATCGTATCTTTACCCGTATTGGCGCCTCTGACGATCT
GGCCTCTGGCCGTTCAACCTTTATGGTAGAAATGACAGAAACCGCCAACATTCTACACAACGCCACCGCCAGTAGCTTAG
TGTTAATGGATGAAATCGGCCGCGGCACATCCACCTATGATGGTTTATCGCTCGCTTGGTCGGCGGCAGAGTATTTAGCC
CAGCAAGTCGGCGCTATGACCCTATTCGCCACCCATTATTTTGAACTAACTCAGTTGCCTGAATTAATGGCTGGTGTTTA
CAATGTGCACCTCGATGCCATTGAACACGACGATACCATCGCCTTTATGCATGCAGTGCAAGAAGGCGCCGCTAGTAAAA
GCTACGGCTTACAAGTTGCGGCGCTTGCCGGCGTACCAAACAAAGTGATTAAAGCCGCTAAACATAAGTTGCAGCAATTG
GAGAGTCGCGATCATCAAGCTGAAGGAACGAGGACGCCTATTCAAAGCTTACTCGCGTTACCTGAACCGGTTGAGAATCC
AGCGCTAACGAAGTTAAGTAGCATTAATCCCGATAACTTAACGCCAAAACAAGCACTTGATTTGCTCTATGAGCTGAAAC
GTCTGAGCTAA

Protein sequence :
MNVIDTDDLEKHTPMMRQYLTMKAEHHDMLLFYRMGDFYELFYDDAKRASELLGISLTARGKSGGDPIPMAGLPYHAVEG
YLAKLVQIGQSVAICEQIGDPATSKGPVERKVVRIVTPGTLTDEALLQERQDNLLAAVYQGKIGFGYATLDVSSGRFVIA
ELDTRESLEAELQRTNPVEILYSEDFGELGLLNGFKGKRRRPEWEFDYDTSIKLLLAQFGTKDLHGFGIADARLSLQAAG
CLMQYVKDTQRTALPHINAITRFNQTDSIVLDAATRRNLELTQNLAGGRDNTLAAVLDNTATPMGSRMLQRWIHQPLRDP
KHIKARQQAVTELLDTAAHEGLHEQLKALGDIERIMARLALRTARPRDFARLRQALGLLPELQQSLSTLSAPHTTQLRQH
LGEFPAEQALLERAIVDNPPMLIRDGGVIREGYNSELDEWRGLSEGASDYLVQLEAREKERTGINTLKVGYNRVHGYYIE
VSRLQSSQVPLNYQRRQTLKNMERYITPELKEYEEKVLSSQGKALALEKQLWEQLFDLILPKLHELQAFARAAAELDVLS
NFAERAETLGYTCPELSQDIGVQIEAGRHPVVERVSQTPFIANPVTLHNQRRMLIVTGPNMGGKSTYMRQVALITLMAHI
GCFVPADCALIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATASSLVLMDEIGRGTSTYDGLSLAWSAAEYLA
QQVGAMTLFATHYFELTQLPELMAGVYNVHLDAIEHDDTIAFMHAVQEGAASKSYGLQVAALAGVPNKVIKAAKHKLQQL
ESRDHQAEGTRTPIQSLLALPEPVENPALTKLSSINPDNLTPKQALDLLYELKRLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal223_1246 YP_002357179.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 68