Gene Information

Name : Sbal223_1211 (Sbal223_1211)
Accession : YP_002357147.1
Strain : Shewanella baltica OS223
Genome accession: NC_011663
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 1428982 - 1430136 bp
Length : 1155 bp
Strand : +
Note : KEGG: spc:Sputcn32_2778 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein

DNA sequence :
ATGAGCTTGAACATAAGTTGGTCCGTACTCGATACCCAAATGATGAGCCGCGCGATTCAATTGGCGCGCAAAGGCTTTTA
CACCACGAGACCCAATCCCAGTGTGGGCTGCGTTATCGTTAAAGATAATCAGATCGTCGGCGAAGGTTATCATCAAAAAG
CGGGTGAGCCCCACGCCGAAGTGCATGCACTACGTATGGCTGGCGAACACGCCCGCGGCGCAACGGCCTATGTCACCTTA
GAGCCCTGCAGTCATTATGGCCGCACGCCGCCCTGCGCCTTGGCACTGATCAATATTGGCGTTAAGCGTGTGGTGGTGGC
GGTTGAAGATCCAAATCCGCAAGTGGCTGGTCGCGGTATTCAAATGCTGCGCGACGCCGGTATTGAAGTGGATGTGGGAT
TACACCGCGATGAAGCCTATGCCTTGAATTTAGGCTTTATGAAGCGCATGGAATCGGGTTTACCCAGAGTTACAGTCAAA
TTGGCTGCGAGTCTCGATGGTAAAACCGCGCTGTCTAACGGTGTGTCTAAATGGATTACCGGGCCTGAATCTCGCCGCGA
CGTGCAGCGCTTACGCTTACGTTCCTGCGCTTTGGTCACTGGGATTGAAACCATACTGGCTGACGATCCCTCACTCAATG
TGCGATATCAAGAACTTGGCGGCATAAAAGACAGCGTAACCGAGGCGCAATTACTGCAGCCATTAAGAGTGATACTCGAC
AGTCGCGCCCGTTTGCCGTTATCGGCTGCCTGTTTGGCTATCGTATCGCCGATAATCTTGGTCTCGACCGTGGCTTATCC
CGCAGAGTTTCAAGCACAATTGCCCTCCCATGTGAGTTGCCTCGTGTTACCTGCTATTGCAGGTCGCGTATCCTTACCTG
AACTATTAAGCTATTTAGGCCAAAGTTGTAATCACGTGCTGGTGGAAGCGGGTGCAACCTTAGCGGGCGCTTTTTTAGCG
CAGGGGCTGGCCGATGAATTAGTGCTGTACCAAGCGATGAAAATCCTCGGTGGGCAAGGGCGTAATCTATTGCAGCTACC
CGATTATCAAACCATGGCGCAAATTCCTGCATTAATGTTGGTCGATGAGCGCAAATTAGGGCCAGATACCCGTTTAATCT
TGAGCGTTATGCTTGATACTTCTTTAATTAATTAA

Protein sequence :
MSLNISWSVLDTQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRMAGEHARGATAYVTL
EPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVAGRGIQMLRDAGIEVDVGLHRDEAYALNLGFMKRMESGLPRVTVK
LAASLDGKTALSNGVSKWITGPESRRDVQRLRLRSCALVTGIETILADDPSLNVRYQELGGIKDSVTEAQLLQPLRVILD
SRARLPLSAACLAIVSPIILVSTVAYPAEFQAQLPSHVSCLVLPAIAGRVSLPELLSYLGQSCNHVLVEAGATLAGAFLA
QGLADELVLYQAMKILGGQGRNLLQLPDYQTMAQIPALMLVDERKLGPDTRLILSVMLDTSLIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 9e-71 51
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 9e-71 51