Gene Information

Name : Tmz1t_0972 (Tmz1t_0972)
Accession : YP_002354634.1
Strain : Thauera sp. MZ1T
Genome accession: NC_011662
Putative virulence/resistance : Unknown
Product : DEAD-like helicase
Function : -
COG functional category : K : Transcription
COG ID : COG0553
EC number : -
Position : 1073023 - 1075293 bp
Length : 2271 bp
Strand : -
Note : SMART: DEAD-like helicase; KEGG: ajs:Ajs_2220 helicase domain-containing protein

DNA sequence :
ATGTCCCTCGATCTCGAAACCGTTCCCGAAACCGCTGTGCAGGGCGACCTGCTCGAAACGGCCGCTTCACCCCTCACGCT
CAGCCTGCAGGACTTCGTATCGGAGTTCGGCGACGAGCTTCTCGACTCGCTCAACCGCGCCAATCCTCCGGTCTACACCG
GCCAGGTGCGGGTGCATCGGCAACTGATCCTCGCCGCGCTCAAGCGCAAGCTGTTCCCGGCGCAAGCCGATGTGGTCCAC
GCCGTCACCGAGCTGTTGGTCGACCGTGGCGAACGCGCCGCGATCGTCAATGGCGAGATGGGCTGCGGCAAGACGACGGT
GGGTATTGCCACCGCCGCCGTGCTCAACGCCGAAGGCTACCGCCGCACCCTGGTGCTCTCGCCACCCCACCTGGTCTACA
AGTGGCGGCGCGAAATCCAGGAGACGGTGGCCGGCGCCAAGGTCTGGGTGCTCAATGGCCCGGACACGCTGGTCAAGCTG
CTGAAACTGCGCGAGCAGTTGGGCGTGCCGGCCCAGGGCCAGGAGTTCTTCGTCCTGGGCCGTGTGCGGATGCGGATGGG
GTTCCACTGGAAGCCTATCTTCGTTCGGCGGCGCACGCCTCACGGCGACGTGGGGGCCTGCCCGGGTTGCGGGCATGTCA
TCACCGACCTGGACGGCGAGCCTGTCAACACCATCGATCTAGAAGCGGAAGAGTCCCGCCGCAAATGCAGCCACTGCCGC
GCACCGCTGTGGTCGTTGATCCGTCCCAGAGGCCTGTCCGCCAGCGACCAGTCCTCGAGCGTGCTCAAGGCACTGAAGCG
TATTCCAACCATCGGGGAAGTCACCGCGCAGAAGCTGATGCAGAAGTTCGGTGACGCCTTCCTCGCGTCGATGCTCGGGG
ACAACATCCACGAGTTCATCAACCTGATGGATGGCAACGGCGAGCTGGTCTTCTCGGACCGGCAAGCCCATCGGATGGAA
CGCGCGATGGCCAACATGGAGTTCGGCTTCGGCGAGGGCGGCTACCAGCCGTCCGAGTTCATCAAGAGGCAGCTTCCCCA
AGGTACGTTCGACCTGCTCATCGCCGACGAGGCGCACGAGTACAAGAACGGCGGCTCCGCCCAGGGCCAGGCCATGGGGG
TGTTGGCGGCCAAGGCGCGCAAGACGCTGCTGCTCACCGGCACACTGATGGGCGGCTACGGCGACGACCTGTTCCACCTG
CTGTTCCGCGCCCTGCCGGGGCGGATGATCGAAGACGGCTACCGGCCGACGAAGAGCGGCAGCATGACCTCGGCCGCGAT
GGCGTTCATGCGCGATCACGGTGTCTTGAAGGACATCTACTCCGAGAGCACCGGCACGGCGCACAAGACGGCCAAAGGCA
CCAAGGTATCGGTGCGCACGGTCAAGGCGCCGGGTTTCGGTCCGAAGGGCGTGCTGCGTTGCGTTCTGCCGTTCACGGTC
TTCCTCAAGTTGAAGGACATCGGCGGCAATGTGCTGCCGCCCTACGACGAGGAGTTCCGCGAAGTCGCGATGGACACGGC
GCAGGCCGCGGCCTACCGCGATCTGGCGGGTCGCCTGACCCAGGAGCTGAAGCAGGCCCTGGCGAAGCGCGACACGACGC
TGCTCGGTGTAGTCCTCAACGTGCTGCTGGCCTGGCCGGACTGCTGCTTCCGGTCGGAAACGGTGGTGCATCCGCGCACG
CGCAACACCTTGGCGTTCGTTCCGGCTCAGTTCAACGGGCTGGAGGTGATGCCCAAGGAACGCGAGCTGATCGAGATCTG
CAAGCAGGAGAAGGCAGAAGGTCGCAAGACCCTGGTCTATTCGGTCTACACCGGCACCCGCGACACCACGTCGCGTTTGA
AGGTGCTGCTGGAGCAGGAAGGCTTCAAGGTGGCGGTGCTGCGCGCGAGCGTGGATGCCTCCCGCCGCGAGGACTGGATC
GCCGAGCAGTTGGACCGTGGCATCGACGTGCTCATCACCAATCCCGAGCTGGTGAAAACCGGCCTGGACTTGCTGGAGTT
CCCGACCATCGTGTTCCTCCAGTCCGGCTACAACGTGTATTCGTTGCAGCAGGCCGCCCGGCGCTCATGGCGCATCGGCC
AGAAGCAGCCGGTGCGCGTGATCTACCTCGGCTACGCCAACTCCTCGCAGATGACCTGCCTGGGGTTGATGGCCCGGAAG
ATCATGGTGTCGCAATCCACCTCGGGCGACGTTCCTGAATCCGGGCTCGATGTCCTGAACCAGGATGGCGACTCGGTGGA
GGTGGCACTGGCTCGGCAGTTGGTGCATTGA

Protein sequence :
MSLDLETVPETAVQGDLLETAASPLTLSLQDFVSEFGDELLDSLNRANPPVYTGQVRVHRQLILAALKRKLFPAQADVVH
AVTELLVDRGERAAIVNGEMGCGKTTVGIATAAVLNAEGYRRTLVLSPPHLVYKWRREIQETVAGAKVWVLNGPDTLVKL
LKLREQLGVPAQGQEFFVLGRVRMRMGFHWKPIFVRRRTPHGDVGACPGCGHVITDLDGEPVNTIDLEAEESRRKCSHCR
APLWSLIRPRGLSASDQSSSVLKALKRIPTIGEVTAQKLMQKFGDAFLASMLGDNIHEFINLMDGNGELVFSDRQAHRME
RAMANMEFGFGEGGYQPSEFIKRQLPQGTFDLLIADEAHEYKNGGSAQGQAMGVLAAKARKTLLLTGTLMGGYGDDLFHL
LFRALPGRMIEDGYRPTKSGSMTSAAMAFMRDHGVLKDIYSESTGTAHKTAKGTKVSVRTVKAPGFGPKGVLRCVLPFTV
FLKLKDIGGNVLPPYDEEFREVAMDTAQAAAYRDLAGRLTQELKQALAKRDTTLLGVVLNVLLAWPDCCFRSETVVHPRT
RNTLAFVPAQFNGLEVMPKERELIEICKQEKAEGRKTLVYSVYTGTRDTTSRLKVLLEQEGFKVAVLRASVDASRREDWI
AEQLDRGIDVLITNPELVKTGLDLLEFPTIVFLQSGYNVYSLQQAARRSWRIGQKQPVRVIYLGYANSSQMTCLGLMARK
IMVSQSTSGDVPESGLDVLNQDGDSVEVALARQLVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C71 AAN62165.1 conserved hypothetical plasmid protein Not tested PAGI-2(C) Protein 0.0 92
ORF SG81 AAN62302.1 conserved hypothetical plasmid protein Not tested PAGI-3(SG) Protein 0.0 91
RL063 AAP84188.1 plasmid related protein Not tested PAPI-1 Protein 0.0 71
unnamed ABR13404.1 putative helicase Not tested PAGI-5 Protein 0.0 71
pph67 CAI36108.1 superfamily II DNA/RNA helicase Not tested PPHGI-1 Protein 0.0 69
yea AAW83099.1 Yea Not tested GGI Protein 2e-176 50