Gene Information

Name : Tmz1t_0965 (Tmz1t_0965)
Accession : YP_002354627.1
Strain : Thauera sp. MZ1T
Genome accession: NC_011662
Putative virulence/resistance : Unknown
Product : lytic transglycosylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1061487 - 1062107 bp
Length : 621 bp
Strand : -
Note : PFAM: lytic transglycosylase catalytic; KEGG: mpt:Mpe_A2378 hypothetical protein

DNA sequence :
ATGGCAGCGGCAATAGGTACTCCGGGCCGGGAGCGTCGGCCGTCCCGCGTCGCCATCCGCTTGATCGGTGCCGCGCTGCT
GCTCGCGAGCGGGGGCTGGTCGTTGGCGGCGCTGGCGCGTGATGTGCCACCTCCGGCCTATCAAATGGCGGCGCATCGTG
CAGACGTGCCGGCGGCGGTGCTGTACGCGGTGGCCTTGCAGGAGAGCGGCGCCATGCTGCGCGGGCGCCTGATCCCCTGG
CCGTGGACGCTCAACGTCGCCGGCACGCCACAGCGCTACGCCACCCGCGCCGAGGCCTGCGCGGGGCTGCACCGTGCGCT
CACCCACACGCCGGCCAATCGCATCGACGCCGGCCTCGGCCAGGTCAATCTCGGCTACCACACGCATCGCTACACGCAGC
CCTGCGAGCTGCTGGACCCATACCGCAACCTCGCCATCGCCGCGGAAATCCTGCGCGAACAGCACACGCCGGGCGAGGAC
TGGCTGCTTGCCATCGGCCGCTACCACCGGCCCGCCGGCGGGGCACCTGCGGCGCGCTACCGGCGCAGTGTGCATCGGCA
CCTGACCCGCGTGCTCGACCCCGGCGTTCCCGTTCCAACCCTCCAGGCCACCACGCCATGA

Protein sequence :
MAAAIGTPGRERRPSRVAIRLIGAALLLASGGWSLAALARDVPPPAYQMAAHRADVPAAVLYAVALQESGAMLRGRLIPW
PWTLNVAGTPQRYATRAEACAGLHRALTHTPANRIDAGLGQVNLGYHTHRYTQPCELLDPYRNLAIAAEILREQHTPGED
WLLAIGRYHRPAGGAPAARYRRSVHRHLTRVLDPGVPVPTLQATTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG70 AAN62292.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 4e-49 79
ORF C67 AAN62161.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 9e-47 77
unnamed ABR13378.1 hypothetical protein Not tested PAGI-5 Protein 4e-24 54
EXA50 ABD94659.1 conserved hypothetical protein Not tested ExoU island A Protein 6e-27 54
RL050 AAP84175.1 conserved hypothetical protein Not tested PAPI-1 Protein 6e-24 54
PMI2591 YP_002152310.1 lytic transglycosylase Not tested Not named Protein 2e-17 46