Gene Information

Name : Tmz1t_3721 (Tmz1t_3721)
Accession : YP_002890691.1
Strain : Thauera sp. MZ1T
Genome accession: NC_011662
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 4088485 - 4089990 bp
Length : 1506 bp
Strand : -
Note : PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; ATPase AAA; KEGG: azo:azo3493 sigma-54 depen

DNA sequence : 
ATGGTCGCGAAACGGATCGGGGGCGGCGGGGACGACGTGCAGATGGCGCGCGGCGTGCGGGGCGACGAGGCGAAGGCGCT
CGCGCAAGGCGGAGTCGGGCGCGCCGAGCCCGCGCGCCCGGTGGAGCTCGCCGACTACCAGTGGCCTGCGCACTCGGTGC
TGGTGGTCGACGACGAGGAGGGCATGCGCAATTTCCTCGAGCGCACGCTCGCGCGCCGCTGCGGCATGGTGCAGTCGGCC
GCCGATGCCGAGCACGCCGCGGTGCTGATGGCGCGTCTGCATTTCGACCTGCTGGTCCTCGACATCGCCCTGCCTGGCAA
GTCGGGGATCGAGTGGCTGCACGAGCTGCGCGAGAATGGTTATGCCGGCGACGTGATCCTGATCACCGCCTTCGCCGACA
TGGAGACCGCGATCGACGCGCTGCGCGGCGGCGCCTCGGACTTCATCCTCAAGCCCTTCCGCGTCGACCAGATCCTCAAC
TCGATCAAGCGCTGCTTCGAGCGTGCCGGCCTGGCGCGCGAGAACTTCGTGCTGCGCCGCGAGCTCGCCGGCCTGGGCGC
CGAGCCCACCGGGCTGATCGGCCACTCGCCCGCGATGGAGCAGCTGCGCGCGCTGGTGCGCCGCGTCGGGCAGATGCCGA
GCACGGTGCTGCTGCTGGGCGAATCCGGTACCGGCAAGGAGGTGGTGGCGCGCGCGTTGCACCAGACCAGCCCGCGCGCG
CAGCGCCCCTTCGTGCCGCTCAACTGCGCGGCGATCGCCTCCGAGCTGATCGAGAGCGAGCTCTTCGGCCACGTCAAGGG
CGCCTTCACCGGCGCCACCGAGAACCGCAACGGTCTGTTCTACTACGCCCACGGCGGCACGCTCTTCCTCGACGAGATCA
GCGAGCTGCCGCTGGCGATGCAGACCCGGCTGCTGCGGGTACTCGAGGAGCGCAAGCTGCGCCCGGTCGGTTCCGAGCGC
GAGCTGCCGGTGGATGTACGCATCATCGCCGCCTCCAACCGCGACCTCGCCGCCGAGGTGCGCGCCGGACGCTTCCGCGA
GGACCTCTACTACCGCCTCGCGGTGGTGGACATCGGCCTGCCGCCGCTGCGCGACCGTACCGAGGACATCCCCGAGCTGA
TGCGCCACTTCATGCAGCAGTTTTCCGTCCAGCTCGGCGTGCCGCCGCTGCCGCTCTCGCACGAGGTGGTGAACCGGCTC
GCCGGCTACACCTGGCCTGGCAACGTGCGCGAACTGCGCAACTACATCGAGCGCTCGCTGATTCTCGGCCACTTCCCGGC
GCAGCCGAGCGCCGCACCGACCGCCGCGCCGACGCCGGCGGGCGAGCTGGAGTCGAGCCTGGCCGAGGTCGAGCGCCGCC
ACATCGAGCGTGTGACCGCCGCCTGCGAGGGCAACAAGACCGAGGCCGCGCGCCGGCTGGGCGTGTCGCGCAAGACCCTG
GAGCGCAAGTTCGCCGAGTGGGCGCTCGAGGACGCCGCGGCCGCGCGTGCGGAGCGGCGGGCCTGA

Protein sequence : 
MVAKRIGGGGDDVQMARGVRGDEAKALAQGGVGRAEPARPVELADYQWPAHSVLVVDDEEGMRNFLERTLARRCGMVQSA
ADAEHAAVLMARLHFDLLVLDIALPGKSGIEWLHELRENGYAGDVILITAFADMETAIDALRGGASDFILKPFRVDQILN
SIKRCFERAGLARENFVLRRELAGLGAEPTGLIGHSPAMEQLRALVRRVGQMPSTVLLLGESGTGKEVVARALHQTSPRA
QRPFVPLNCAAIASELIESELFGHVKGAFTGATENRNGLFYYAHGGTLFLDEISELPLAMQTRLLRVLEERKLRPVGSER
ELPVDVRIIAASNRDLAAEVRAGRFREDLYYRLAVVDIGLPPLRDRTEDIPELMRHFMQQFSVQLGVPPLPLSHEVVNRL
AGYTWPGNVRELRNYIERSLILGHFPAQPSAAPTAAPTPAGELESSLAEVERRHIERVTAACEGNKTEAARRLGVSRKTL
ERKFAEWALEDAAAARAERRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 1e-64 44
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 1e-64 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmz1t_3721 YP_002890691.1 Fis family transcriptional regulator BAC0089 Protein 2e-74 48
Tmz1t_3721 YP_002890691.1 Fis family transcriptional regulator BAC0467 Protein 3e-66 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmz1t_3721 YP_002890691.1 Fis family transcriptional regulator VFG1214 Protein 7e-68 45
Tmz1t_3721 YP_002890691.1 Fis family transcriptional regulator VFG1249 Protein 6e-60 43