Gene Information

Name : Tmz1t_3192 (Tmz1t_3192)
Accession : YP_002890164.1
Strain : Thauera sp. MZ1T
Genome accession: NC_011662
Putative virulence/resistance : Virulence
Product : LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 3473471 - 3474109 bp
Length : 639 bp
Strand : -
Note : PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: azo:azo1376 transcriptional regulatory protein

DNA sequence : 
TTGAGCGCAGTGCCCGCAGCGCCTGACCAGATCGTACATGTCGTCGACGACGACGAAGCCCTGCGCGACTCGCTCGCCTG
GATGCTGGAGGCCAACGGCCACGCGGTCGCGGTGCACGAGTCGGGCGAGGCCTTCCTCGCCGCCTGCACGCCGGAGATGA
CCGGCTGCGTGCTGCTCGACGTGCGCATGCCGGGCATGAGCGGGCTGGAGGTGTTCGAGGAGCTCGGGCGGCGGCGCTGC
GGGCTGCCGGTGGTGTTCATCACCGGCCACGGCGACGTGCCGATGGCGGTGTCCGCGCTCAAGCAGGGCGCGGTGGATTT
CGTCGAGAAACCCTTCGGCGAGCGCGAGATGCTGCGCGTGGTCGAGCAGTGCCTGCGCCTCGAGCGCGAGACCCGCGACC
GCCGCCTGCAGGAGGCCGACACCGCGCGCCGGCTCGGGCTGCTCACCCAGCGCGAGCGCGAGGTGCTCGAGCTGATCATC
GTCGGCAAGCTGAACAAGCAGATCGCCGACGTGCTCGGCATCAGCATCAAGACCGTCGAGGTGCATCGCGCGCGCGTGAT
GGAGAAGATGGGCGCGCATTCGCTCGCCGAACTCGTCCAGCACGTGGTGGTACTCGAACCCGGCGCCGTTCCGCGCTGA

Protein sequence : 
MSAVPAAPDQIVHVVDDDEALRDSLAWMLEANGHAVAVHESGEAFLAACTPEMTGCVLLDVRMPGMSGLEVFEELGRRRC
GLPVVFITGHGDVPMAVSALKQGAVDFVEKPFGEREMLRVVEQCLRLERETRDRRLQEADTARRLGLLTQREREVLELII
VGKLNKQIADVLGISIKTVEVHRARVMEKMGAHSLAELVQHVVVLEPGAVPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 3e-27 44
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 3e-27 44
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 3e-27 44
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 2e-27 44
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 3e-27 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmz1t_3192 YP_002890164.1 LuxR family transcriptional regulator VFG0488 Protein 1e-27 44