Gene Information

Name : Tmz1t_2971 (Tmz1t_2971)
Accession : YP_002889947.1
Strain : Thauera sp. MZ1T
Genome accession: NC_011662
Putative virulence/resistance : Unknown
Product : RND efflux transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG1033
EC number : -
Position : 3215541 - 3217934 bp
Length : 2394 bp
Strand : -
Note : KEGG: bph:Bphy_4865 RND efflux transporter

DNA sequence :
ATGCTCAATCCCTTCAGCGTCAGCGAGGTCGACACCTTCCTGACCCGCTACCTGCGCCTGCTCGAGGCGGTGTGCTTCCG
CTTCCGCGGCACCATCCTGGTCGCGCTCATGTTGTTCACCGCGCTGATGGGCTACTTTGCCCTGCAGCTGCGCATGGACG
CCGGCTTCGAGAAGCAGATGCCGATCGGCCACGAGTACATCCAGACCTTCGACAAGTATCGCGAGGACGTGCTCGGCGCC
AACCGGCTGAACTTCGTCGTGAAGGCGCGCAGCGGCGACATCTGGACCCAGGCCGGGCTGGAACGCCTGTACGAGGTCAC
CCAGGCGGTGAGCTTCCTGCCCAACGTCGACCGCCTCGGCGTGCAGTCGCTGTGGACGCCCAACTCCTTCGTCAACGAGA
TCACCGAGGAGGGCTTTCGCGCCGATCCGCTGATCTCGGGCACCATCATGCCGCGCGACCTCACGCCCGAGATCATCGCC
GGCATCCAGCGCGCGGCCAGCCAGGGCGGCTTCATCGGCACCCTGGTGGCGCGCGACCAGACCAGCGCGATGATCGTCGC
CGAGCTGCACGAGCGCGACCGCGAGGGCAAGGCGCTCGACTACGTCGCCTACAACCGCATCCTCGAGGAGCTGCGCGCGA
AATTCGAGGACGCGCAGTTCGAGGTCCAGATCATCGGCTTCGCCAAGCAGATCGGCGACATCGCCGACGGCGCCTCGGCG
GTGCTCGAGTTCTGCGCGATCGCGCTGCTGCTGACCGCGCTCGCGGTGTACTGGTACTGCCACTCGGTGCGCTTCACCCT
GCTGCCGATCGCCTGCTCGCTGACCTCGCTGGTGTGGCAGTTCGGCACCCTCAGGCTGCTCGGCTACGGGCTCGACCCGC
TCGCGGTGCTGGTGCCCTTCCTGGTGTTCGCGATCGGCGTCTCGCACGGCGTGCAGCAGATCAACTTCATCGTGCGCGAG
CTCTCGCACGGCAAATCGAGCGACGAGGCCGCGCGCGCCAGCTTCACCGGGCTGCTGATCCCGGGCACGCTGGCGCTGGT
CACCGCCTTCGTGTCCTTCATCACGCTGATCCTGATCCCGATCCCGATGGTGCGCGAGCTGGCGATCACCGCCTCGCTCG
GCGTCGGCTACAAGATCGTCACCAACCTGGTGATGCTGCCGCTGGCGGCCTCGCTGTTCACCTTCACCAAGGAATACGCC
GACAAGGCCGTGCTCAAGCGCGAGCAGCGCTCGGCCTGGCTGCGCACGCTGGCGCGCGTGGCCGAGCCGCGCAACGCGGC
GATCGTGATCCTGGCGACCCTGGCGGTGTTCGCGGTGGCGGTGTGGCAGAGCCACGACCGCGTCATCGGCACGGTGCAGC
CGGGCGCCCCGGAGCTGCGTGCGGAGGCGCGCTTCAACCGCGACGCGGTGTCGATCGCCTCCAGCTACGACACCGGCCTG
GACTGGCTCACGGTCATCTTCGAGGCGCCGCCCGACGCCTGCGACGACGTCGCGGTCGGGCGCTATCAGGACCGCTTCGT
CGCCGAGATTCAGTATGTGCCGGGCGTGCTGTCGGCGCTGTCCTTCTCCGGCCAGCTGCGCACCTACAACGAGGGCTACA
ACGAGGGCAACCCGAAGATGTCCGTGGTACCGGGCGACCCCGGCAACTACGCCGCGCTCGCCACCGAGATCGGCCGCGTG
CGCGGCTTCATGAACAAGGACTGCAGCATGACCGCGGTGCACCTGTTCCTGTCCGATCACAAGGCGACCACGATCAACCG
CGTGATCGCGGCGGTGAAGGCCTTCCGCGAGCGCGACCGCGAGCCCGGGCTGACGATCCGGCTGGCCTCCGGCAACGCCG
GCGTGCAGGCCGCGGTGAACGAGGAGGTGCACAAGTCCGAGCTGCCGATGATGCTCTATGTGTACGCGGCGATCATGGTG
CTGGTGGCGCTGATGTACCGCGACTTCCGTGCGGTGATCGCGTGCTGCCTGCCGCTCACCGTGGGCACCTTCATCGGCTA
CTGGTTCATGAAGGAGCTCGAGATCGGGCTCACCGTGGCGACCCTGCCGGTGATGGTGCTGGCGGTGGGCATCGGCGTCG
ATTACGCCTACTACATCTACAACCGCCTGCAGCTTCACCTGGCGGGCGGCGAGAACATCGTCAAGGCGCTCGAGCACTCC
ATCCTCGAGGTCGGCACCGCGACCATCTTCACCGCGATCACGCTCGCGGCTGGCGTGGCGACCTGGATGTTCTCGGAGCT
CAAGTTCCAGGCCGACATGGGCAAGCTGCTCGCCTTCATGTTCATGGTGAACATGGTGATGGCCATGACCGCGCTGCCGG
CCTTCGCGGTGTGGCTGGAGCGAATTTTCCCGCGCAAGGGGCCGGTGCGTGCGCCGGGCATCCTGGCGCATTGA

Protein sequence :
MLNPFSVSEVDTFLTRYLRLLEAVCFRFRGTILVALMLFTALMGYFALQLRMDAGFEKQMPIGHEYIQTFDKYREDVLGA
NRLNFVVKARSGDIWTQAGLERLYEVTQAVSFLPNVDRLGVQSLWTPNSFVNEITEEGFRADPLISGTIMPRDLTPEIIA
GIQRAASQGGFIGTLVARDQTSAMIVAELHERDREGKALDYVAYNRILEELRAKFEDAQFEVQIIGFAKQIGDIADGASA
VLEFCAIALLLTALAVYWYCHSVRFTLLPIACSLTSLVWQFGTLRLLGYGLDPLAVLVPFLVFAIGVSHGVQQINFIVRE
LSHGKSSDEAARASFTGLLIPGTLALVTAFVSFITLILIPIPMVRELAITASLGVGYKIVTNLVMLPLAASLFTFTKEYA
DKAVLKREQRSAWLRTLARVAEPRNAAIVILATLAVFAVAVWQSHDRVIGTVQPGAPELRAEARFNRDAVSIASSYDTGL
DWLTVIFEAPPDACDDVAVGRYQDRFVAEIQYVPGVLSALSFSGQLRTYNEGYNEGNPKMSVVPGDPGNYAALATEIGRV
RGFMNKDCSMTAVHLFLSDHKATTINRVIAAVKAFRERDREPGLTIRLASGNAGVQAAVNEEVHKSELPMMLYVYAAIMV
LVALMYRDFRAVIACCLPLTVGTFIGYWFMKELEIGLTVATLPVMVLAVGIGVDYAYYIYNRLQLHLAGGENIVKALEHS
ILEVGTATIFTAITLAAGVATWMFSELKFQADMGKLLAFMFMVNMVMAMTALPAFAVWLERIFPRKGPVRAPGILAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01517.1 transport protein Not tested PAGI-1 Protein 0.0 73