Gene Information

Name : Tmz1t_2903 (Tmz1t_2903)
Accession : YP_002889879.1
Strain : Thauera sp. MZ1T
Genome accession: NC_011662
Putative virulence/resistance : Virulence
Product : ATPase, FliI/YscN family
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 3145698 - 3147092 bp
Length : 1395 bp
Strand : +
Note : KEGG: azo:azo2719 ATP synthase; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; SMART: ATPase AAA

DNA sequence :
ATGAACCGTCACCAGGCGCTGTGGCGCGACTTCCTCGGCGACGGCCGCCGCCTGGTCGAGGGCTGCAACCCGCTCGAGGT
CTCCGGCCGCCTCACCCGCATCAACGGCCTGGTCATGGAAGCGGCCGGCATCAAGCTGCCGCTCGGGTCGGGCTGCCGCA
TCCTGGTGCCCGGCGGCGGCGCGGTCGAGGCCGAGGTGGTCGGCTTCAACGGCGACAAGCTCTACATGATGCCCACCGAC
GACGTCTTCGGCCTGGCGCCCGGCGCGCGCGTGCTGCCGATGGAAGTCGGTGTGCCGCGCCTGGTCCCGGGCAAGCGCAT
CGGCCCGCGCCGGCGCGCCGCCGACCGCGCCAAGCACCTGCCGGTGGGCGACGCCCTGCTCGGCCGCGTGGTCGACGGCG
CCGGCCGCCCGCTCGACGGCCAGGGCCCGCTGCACACCCAGGAGACGCGCTCGCTGCAGGGGCGTGCCATCAACCCGCTC
GCACGCGCGCCGATCGCACAGCCGCTCGACGTCGGCGTGCGCGCGATCAACGCGCTGCTCACCGTCGGCCGCGGCCAGCG
CCTCGGCCTGTTCGCCGGTTCCGGCGTGGGCAAGTCGGTGCTGATCGGCATGATGGCGCGCTACACCGAGGCCGAGGTCA
TCGTCGTCGGGCTGATCGGCGAGCGCGGCCGCGAGGTCAAGGAGTTCATCGACCACAGCCTGGGCCCCGAGGGCCTGGCG
CGCTCGGTGGTGGTGGCGGCGCCCGCCGACACCAGCCCGCTGATGCGCATGCAGGGCGCGGCCTATGCCACCACGGTGGC
GGAGTACTTCCGCGACCAGGGCAAGCAGGTGCTGCTGATCATGGACTCGCTGACGCGCTATGCGATGGCGCAGCGCGAGA
TCGCGCTCGCGATCGGCGAACCGCCGGTCACCCGCGGCTACCCGCCGAGCGTGTTCGCCCGCCTGCCCGCGCTGGTCGAG
CGCGCTGGCAACGGCCCCGAGGGCGGTGGCTCGATCACCGCCTTCTACACCGTGCTCGCCGAGGGCGACGACCAGCAGGA
CCCGATCGCCGACGCGGCGCGCGCCATCCTCGACGGCCACTTCGTGCTCTCGCGCAATCTCGCCGACCAGGGCCACTACC
CGGCGATCGACATCGAGCAGTCGATCTCGCGCGCGATGCACAACCTCGTCGGCGACGACCACTTCAACGTGGTGCGCCAG
TTCAAGCAGTTCTTCTCGCGCTACCAGCGTTCTCGCGACCTGATCGCCGTCGGCGCCTACCAGCCCGGCGGCGATCCCCT
GCTCGACATGGCCGTCAAGCTCTACCCCAGGCTCGAAGCCTTCCTGCAACAAGGCATCCAGGAACACGAAACCTACGAGG
GTGCCCTGCAGAAGCTGGCGCAGGTGTTCGGGTGA

Protein sequence :
MNRHQALWRDFLGDGRRLVEGCNPLEVSGRLTRINGLVMEAAGIKLPLGSGCRILVPGGGAVEAEVVGFNGDKLYMMPTD
DVFGLAPGARVLPMEVGVPRLVPGKRIGPRRRAADRAKHLPVGDALLGRVVDGAGRPLDGQGPLHTQETRSLQGRAINPL
ARAPIAQPLDVGVRAINALLTVGRGQRLGLFAGSGVGKSVLIGMMARYTEAEVIVVGLIGERGREVKEFIDHSLGPEGLA
RSVVVAAPADTSPLMRMQGAAYATTVAEYFRDQGKQVLLIMDSLTRYAMAQREIALAIGEPPVTRGYPPSVFARLPALVE
RAGNGPEGGGSITAFYTVLAEGDDQQDPIADAARAILDGHFVLSRNLADQGHYPAIDIEQSISRAMHNLVGDDHFNVVRQ
FKQFFSRYQRSRDLIAVGAYQPGGDPLLDMAVKLYPRLEAFLQQGIQEHETYEGALQKLAQVFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escN CAI43874.1 EscN protein Virulence LEE Protein 9e-76 51
escN AAC38383.1 EscN Virulence LEE Protein 4e-76 51
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-75 51
escN AAK26715.1 EscN Virulence LEE Protein 1e-75 51
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-75 51
escN AAL57542.1 EscN Virulence LEE Protein 1e-75 51
escN CAC81862.1 EscN protein Virulence LEE II Protein 1e-75 51
unnamed AAL06369.1 EscN Virulence LEE Protein 9e-76 51
escN YP_003236088.1 translocator EscN Virulence LEE Protein 2e-76 51
escN AAC31513.1 L0034 Virulence LEE Protein 3e-76 51
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 3e-76 51
escN NP_290268.1 hypothetical protein Virulence LEE Protein 4e-76 51
ECs4568 NP_312595.1 EscN Virulence LEE Protein 4e-76 51
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 7e-80 49
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 6e-74 49
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 6e-74 49
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 9e-73 48
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 4e-72 48
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-72 48
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-72 48
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-81 46
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-81 46
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 3e-82 46
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 3e-82 46
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-80 46
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-81 46
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 2e-80 46
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-82 46
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-81 46
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 6e-74 45
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-72 45
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 5e-68 45
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 5e-68 45
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 7e-65 45
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 8e-67 44
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 1e-61 44
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 1e-61 44
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 1e-61 44
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 1e-61 44
lscN AAO18044.1 LscN Virulence TTSS locus Protein 2e-77 43
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 1e-71 43
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 4e-71 43
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-71 43
invC AAS66861.1 InvC Not tested SSR-2 Protein 1e-58 43
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 3e-59 43
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 7e-67 41
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-67 41
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 5e-63 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmz1t_2903 YP_002889879.1 ATPase, FliI/YscN family VFG2331 Protein 9e-132 67
Tmz1t_2903 YP_002889879.1 ATPase, FliI/YscN family VFG2499 Protein 7e-140 67
Tmz1t_2903 YP_002889879.1 ATPase, FliI/YscN family VFG1254 Protein 1e-123 61
Tmz1t_2903 YP_002889879.1 ATPase, FliI/YscN family VFG0730 Protein 2e-76 51
Tmz1t_2903 YP_002889879.1 ATPase, FliI/YscN family VFG0812 Protein 2e-76 51
Tmz1t_2903 YP_002889879.1 ATPase, FliI/YscN family VFG0515 Protein 5e-73 48
Tmz1t_2903 YP_002889879.1 ATPase, FliI/YscN family VFG0048 Protein 1e-82 45
Tmz1t_2903 YP_002889879.1 ATPase, FliI/YscN family VFG0192 Protein 4e-81 44
Tmz1t_2903 YP_002889879.1 ATPase, FliI/YscN family VFG1008 Protein 8e-59 44
Tmz1t_2903 YP_002889879.1 ATPase, FliI/YscN family VFG0555 Protein 5e-62 44
Tmz1t_2903 YP_002889879.1 ATPase, FliI/YscN family VFG2144 Protein 4e-79 43
Tmz1t_2903 YP_002889879.1 ATPase, FliI/YscN family VFG1778 Protein 2e-58 43
Tmz1t_2903 YP_002889879.1 ATPase, FliI/YscN family VFG0390 Protein 1e-74 41