Gene Information

Name : Tmz1t_0278 (Tmz1t_0278)
Accession : YP_002353966.1
Strain : Thauera sp. MZ1T
Genome accession: NC_011662
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 313322 - 314848 bp
Length : 1527 bp
Strand : +
Note : PFAM: transposase IS66; KEGG: cti:pRALTA_0535 transposase, IS66 family

DNA sequence :
ATGTCGAACACCCCTGTTTCCTCTCCTGACGAAGTCATCGCCCTGCGGGCGAAGGTGAGCGAACAGGCCGCCGAGATCGA
GCACCTGAAGCTGGTGATCGCCAAGCTGCGCCGCATGCAGTTCGGCCGCAGCTCGGAGCAGATGAACGAGATGCTCGGCC
AACTTGAGCTCTCGCTCGAGGAGCTCGAGACCCTGCGTGCCGAGACCCCGGCCGAACCGACGACGCCAGCCGATACGCGC
GAGGCGCCCCCGCCTCGCAAACCGCTCCCCGATCATCTGCCCCGCGACATCGAGGAGCACCTGCCTTCGGCGTGCGACTG
TCCAGCCTGTGGCGCCTCGCTCAAGAAGCTGGGCGAGACCGTGAGTGAGATGCTCGAGTACGTGCCGGCGAGCTTCCGGG
TGATCCGTCATGTGCGCCCGAAGTTCGCCTGCAGCCGCTGCGACACGATCGTGCAGGCGAACGCGCCCGCGCGACCGATC
GCCCGGGGGCTGGCCGGCGCGGGGCTCCTGGCCCATGTGCTGGTCGCGAAGTATTGCGATCACCTGCCGCTGTACCGCCA
GAGCACCATCTACGCTCGGGAGGGTGTCGAACTCGAGCGCTCCACGCTGGCCGACTGGGTGGGGCAATGCAATGCGCTGC
TGCGCCCGTTGGTTGAGGCGCTGCGCAAGCATGTGCTCTCGGCCACCAAGCTGCATGCCGACGACACCCCGGTGCCGGTG
CTCTCGCCGGGTGAAGGCCAGACCCGGACCGGTCGGTTGTGGACCTACGTGCGCGACGACCGCCCCGCAGGCGACGCGAC
GCCGCCGGCGGTGTGGTTCGCCTACTCGCCCAACCGCCGGGGCGAGCACCCGCAACGCCACCTCGCGCACTTCAAGGGCG
TGCTGCAGGCCGATGCCTTTGCCGGATTTGCGCCGCTCTATCTGGGCGGGGCCATCCAGGAGGCCGCCTGTTGGGCGCAT
GTGCGGCGCAAGTTCTTCGATCTGCACAAGGCGCAGGCCTCGCCCCTGGCGGCCGAGGCGCTCAAGCAGATCGGTCTGCT
GTACGCGGTTGAAGAGGCGATTCGCGGCAAACCGCCCGAACTGCGCCGGGCCGAGCGGCAGGCGCGCGCTGGCCCCGTGC
TGGTCGCGCTACGCGCCTGGCTCGACGCCACGCTCAAACAACTCTCGCAGAAATCGGCATTGGCCGAGGCGATCCGCTAT
GCGCTCGCCCGCTGGGACGCGCTCGTGCGCTACAGCACCGACGGGCGCATCGAGATCGACAACAACGCCGCCGAACGGGC
GCTGCGCACGGTCGCCCTGGGGCGGAAGAATTTCCTCTTCGCGGGCTCTGACGCCGGGGGCGAGCGTGCGGCGGCGATCT
ACGGCCTGATCGGCACGGCCAAGCTCAACGGCCTCGACCCCGAGGCCTACCTGCGGCATGTGATCGGCCGCATCGCCGAG
CATCCGGTGAACCGGGTGGCTGAACTGCTGCCGTGGAACGTCGCAGCCGAATTGGCGCCGCCCGAGCTACAGGCCGCCGC
TGCCTGA

Protein sequence :
MSNTPVSSPDEVIALRAKVSEQAAEIEHLKLVIAKLRRMQFGRSSEQMNEMLGQLELSLEELETLRAETPAEPTTPADTR
EAPPPRKPLPDHLPRDIEEHLPSACDCPACGASLKKLGETVSEMLEYVPASFRVIRHVRPKFACSRCDTIVQANAPARPI
ARGLAGAGLLAHVLVAKYCDHLPLYRQSTIYAREGVELERSTLADWVGQCNALLRPLVEALRKHVLSATKLHADDTPVPV
LSPGEGQTRTGRLWTYVRDDRPAGDATPPAVWFAYSPNRRGEHPQRHLAHFKGVLQADAFAGFAPLYLGGAIQEAACWAH
VRRKFFDLHKAQASPLAAEALKQIGLLYAVEEAIRGKPPELRRAERQARAGPVLVALRAWLDATLKQLSQKSALAEAIRY
ALARWDALVRYSTDGRIEIDNNAAERALRTVALGRKNFLFAGSDAGGERAAAIYGLIGTAKLNGLDPEAYLRHVIGRIAE
HPVNRVAELLPWNVAAELAPPELQAAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-102 63
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 7e-112 63
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 5e-128 60
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 3e-103 58
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 2e-98 58
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 3e-115 57
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 5e-114 57
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 5e-114 57
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 1e-114 57
tnp AEA34686.1 transposase Not tested Not named Protein 2e-114 57
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 1e-114 57
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 8e-115 57
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 4e-115 57
unnamed AAC31494.1 L0015 Not tested LEE Protein 7e-115 57
unnamed AAL57570.1 unknown Not tested LEE Protein 6e-115 57
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 4e-115 57
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 3e-103 57
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 3e-103 57
unnamed AAL08460.1 unknown Not tested SRL Protein 3e-79 54
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 1e-89 47
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 1e-89 46
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 9e-72 44
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 3e-75 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmz1t_0278 YP_002353966.1 transposase IS66 VFG1700 Protein 1e-102 63
Tmz1t_0278 YP_002353966.1 transposase IS66 VFG0793 Protein 4e-115 57
Tmz1t_0278 YP_002353966.1 transposase IS66 VFG1051 Protein 2e-79 54