Gene Information

Name : Tmz1t_2794 (Tmz1t_2794)
Accession : YP_002889771.1
Strain : Thauera sp. MZ1T
Genome accession: NC_011662
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3024988 - 3025980 bp
Length : 993 bp
Strand : +
Note : PFAM: integrase; KEGG: pna:Pnap_3921 phage integrase

DNA sequence :
ATGGCATCAATCAGGCAACGCGGGAACAGGTGGCAATGTCGCGTCACACGGCACGGCTTCCCGCCCGAAACCAAGTCCTT
CGCAACGAAGGCGGACGCGGAAACATGGGCACGATCCATCGAAGTCGAGATGGACAAGGGCGTCCATCAGAACCGTGCAT
CAGTCGAGCGAACAACGCTTGCAGACATCCTGCTGCGGTACGCCGAAGAGGTCACGCCCTGCAAGAAGGGGGCGAAGGAT
GAAGCCATCCGGCTGAACGCCCTGCGGGCAAACAAGCTCGCCAAGCATTCACTGGCAAACCTCAGCGCCGCAGCGGTGGC
GAAGTTCCGCGACGAGCGTTTGAAGACCGTATCGGCGGGAACCGTGCTGCGTGACCTCGCCCTGATTTCGTCGGTCCTGA
ACCATGCGCGCAGGGAATGGGGCTTCCCGGTTGAAAACGCCGTTCAGGCGATCCGTAAGCCCCGCCAGCCTCAAGGGCGG
GAACGCGTGCTATCGCACGACGAAGAAGCCCGCCTGCTGGCCGCATCGGCCCCTATCGGGCGTCGTAGTCCCTGGCTCCA
GCCGATCATCATCCTTGCACTGGAAACGGCCATGCGGCGCGGCGAACTGCTTGCGCTGCGGTGGGAGCATGTCAGCCTCG
ACAAGCGCACCGCCCTACTTCCCGACACCAAAAACGGCACACGACGCCTTGTGCCGCTTTCACCCCGCGCAATCGACACC
CTCAAGCACATGCCGCGCGCCATTGATGGGCGCGTGTTCCCAATCTCGGAACCAGCCCTGCACCTGCGGTTCAAGCTGGC
GTGCGACCGAGCGGGAATCGACGGGCTCCACTTCCACGACTTGCGACACACGGCAACCACCAGACTTGCCGAGAAGCTGA
CCAACCTTGCGGAGTTGTCCGCCGTGACCGGACACAAATCGCTCCAGATGCTGAAGCGGTACTACCACCCCAACGCCGAA
GCACTCGCGGAAAAGCTGGCGCGACACGGTTAA

Protein sequence :
MASIRQRGNRWQCRVTRHGFPPETKSFATKADAETWARSIEVEMDKGVHQNRASVERTTLADILLRYAEEVTPCKKGAKD
EAIRLNALRANKLAKHSLANLSAAAVAKFRDERLKTVSAGTVLRDLALISSVLNHARREWGFPVENAVQAIRKPRQPQGR
ERVLSHDEEARLLAASAPIGRRSPWLQPIIILALETAMRRGELLALRWEHVSLDKRTALLPDTKNGTRRLVPLSPRAIDT
LKHMPRAIDGRVFPISEPALHLRFKLACDRAGIDGLHFHDLRHTATTRLAEKLTNLAELSAVTGHKSLQMLKRYYHPNAE
ALAEKLARHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13530.1 site-specific recombinase Not tested PAGI-8 Protein 4e-45 41
rci AAC38070.2 Rci Not tested SPI-7 Protein 7e-40 41
rci NP_458640.1 shufflon-specific DNA recombinase Not tested SPI-7 Protein 9e-40 41
rci NP_807850.1 shufflon-specific DNA recombinase Not tested SPI-7 Protein 9e-40 41