Gene Information

Name : Tmz1t_2646 (Tmz1t_2646)
Accession : YP_002889625.1
Strain : Thauera sp. MZ1T
Genome accession: NC_011662
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2860652 - 2863234 bp
Length : 2583 bp
Strand : -
Note : KEGG: azo:azo1566 ATP-dependent Clp protease ATP-binding subunit ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; ATPase AAA; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA

DNA sequence :
ATGCGTTTCGACAAGCTCACCACCAAGTTCCAGCAGGCCCTCGCCGATGCGCAGAGCATCGCCGTGGGCAACGACCAGCA
GTTCATCGAGCCGCTGCACGTGCTGCAGGCCCTGCTCGAGCAGGACGACGGCGGCAGTGTGTCGCTGCTGCAGCGCGCCG
GGGTCAATGTCCCGCCGCTCAAGAATGCGGTCGCCAAGGCCGTCGGCCGCCTGCCCAAGGTGGAAGGGCACGGCGGCGAG
GTCAGCATCGGGCGCGACCTCAACAACCTGCTCAACGTCACCGACCGTGAAGCGCAGAAACGCGGCGACCAGTTCATCGC
CAGCGAGATGTTCCTGCTCGCGCTCGCGGACGACAAGGGCGAGGCCGGCCGCCTGCTCAAGGAGAACGGCCTGGCGCGCA
AGGCGCTCGAGGCCGCGATCGAGGCGGTGCGCGGCGGCGCCAACGTGGGCAGCCAGGACGCCGAAGGCCAGCGCGAATCG
CTGTCGAAGTACTGTCTCGACCTCACCGAGCGCGCACGAAGCGGCAAGCTCGACCCGGTGATCGGTCGTGACGACGAGAT
CCGCCGCGCCATCCAGATCCTGCAGCGCCGCACCAAGAACAACCCGGTGCTGATCGGCGAGCCGGGCGTGGGCAAGACCG
CGATCGTCGAGGGCCTGGCGCAGCGCATCGTCAATGACGAGGTGCCCGAGACGCTCAAGGGCAAGCGCGTGCTCTCGCTC
GACATGGCGGCGCTGCTCGCCGGCGCCAAATACCGCGGCGAGTTCGAGGAGCGCCTGAAGGCGGTGCTCAAGGAGATCGC
CCAGGAAGAGGGGCGCATCATCGTGTTCATCGACGAGCTCCACACCATGGTGGGCGCCGGCAAGGCCGAGGGCGCGATCG
ATGCCGGCAACATGCTCAAGCCCGCGCTCGCACGCGGCGAGTTGCACTGCATCGGCGCCACCACGCTCGACGAATACCGC
AAGTACATCGAGAAGGACGCGGCGCTCGAGCGCCGCTTCCAGAAGGTGCTCGTCGAGGAGCCTTCGGTCGAGGCGACCAT
CGCCATCCTGCGCGGCCTGCAGGAGAAGTACGAGATCCACCACGGCGTCGACATCACCGACCCGGCCATCGTCGCCGCGG
CCGAACTGTCGCACCGCTATATCACCGACCGCTTCCTGCCCGACAAGGCGATCGACCTGATCGACGAGGCCGCGGCGCGC
ATCAAGATGGAGATCGACTCCAAGCCCGAGGTCATGGACAAGCTCGACCGTCGCATGATCCAGCTCAAGATCGAGCGCGA
GGCGGTGAAGAAGGAGAAGGACGAGGCTTCGCTCAAGCGCCTGCAACTGATCGAGGACGAGCTCGCCAAGCTGCAGCGCG
AGTACAACGACCTGGAAGAGGTGTGGAAGGCGGAGAAGGCCAAGGTCGCCGGCTCGGCCCACATCAAGGAGGAGATCGAC
GCGCTGCGCGCGCAGATGGCCGAGTACCAACGGAAGGGCCAGCTCGACAAGGTCGCCGAGCTGCAGTACGGCAAGCTGCC
GCAGCTCGAGGGCCAGCTCAGGATGGCCGAGCAGGCGGGCCAGAATGCCGCGCCCAACAAGCTGCTGCGCACCGAGGTGG
GCGCCGAGGAGATCGCCGAGGTCGTATCGCGCGCCACCGGCATCCCGGTGAGCAAGATGATGCAGGGCGAGCGCGAGAAG
CTCCTGAAGATGGAGGACAAGCTGCACGAGCGCGTGGTCGGCCAGGACGAGGCGGTGCGCCTGGTGGCCGACGCCATCCG
GCGCTCGCGCGCGGGCCTGTCGGACGAGAACCGTCCCTACGGCTCCTTCCTCTTCCTCGGCCCCACCGGGGTGGGCAAGA
CCGAGCTGTGCAAGACGCTGGCGAACTTCCTGTTCGATTCCGAGGAACACCTGATCCGCATCGACATGAGCGAGTTCATG
GAGAAGCACTCGGTGGCGCGCCTGATCGGTGCGCCCCCGGGCTACGTCGGCTACGAGGAAGGCGGCTACCTGACCGAGCA
GGTGCGGCGCAAGCCCTATAGCGTGATCCTCTTCGACGAGGTCGAGAAGGCGCATCCGGACGTGTTCAACGTGCTGCTGC
AGGTGCTCGACGACGGTCGCATGACGGACGGCCAGGGCCGCACGGTGGACTTCAAGAACACCGTGATCGTGATGACCTCC
AACCTCGGCAGCCAGATGATCCAGGCCATGGCGGGAGACGACTACGGGGTGATCAAGCTCGCGGTGATGGCGGAAGTGAA
GACCTACTTCCGTCCGGAGTTCATCAACCGCATCGACGAGGTGGTGGTGTTCCACGCGCTGGATGAAAAGCACATCGCCG
GCATCGCGAAGATTCAGTTGCAGTACCTCGAGAAGCGCCTGGCGCGGCTGGAAATGGGCATGGAGATCAGCGATGCGGCG
CTCGCCGAGCTCGCGACTGCCGGCTTCGACCCGGTGTTTGGCGCACGGCCCTTGAAGCGGGCGATCCAGGAGCGCATCGA
GAACCCGCTCGCGAAGGCGATCCTCGAAGGTCGCTTCGCCGCCAAGGACTGCATCCGGGTGGATGCCGAGGGCGGGCAAC
TGGTGTTCCGGCGCGCCGACTGA

Protein sequence :
MRFDKLTTKFQQALADAQSIAVGNDQQFIEPLHVLQALLEQDDGGSVSLLQRAGVNVPPLKNAVAKAVGRLPKVEGHGGE
VSIGRDLNNLLNVTDREAQKRGDQFIASEMFLLALADDKGEAGRLLKENGLARKALEAAIEAVRGGANVGSQDAEGQRES
LSKYCLDLTERARSGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLKGKRVLSL
DMAALLAGAKYRGEFEERLKAVLKEIAQEEGRIIVFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYR
KYIEKDAALERRFQKVLVEEPSVEATIAILRGLQEKYEIHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR
IKMEIDSKPEVMDKLDRRMIQLKIEREAVKKEKDEASLKRLQLIEDELAKLQREYNDLEEVWKAEKAKVAGSAHIKEEID
ALRAQMAEYQRKGQLDKVAELQYGKLPQLEGQLRMAEQAGQNAAPNKLLRTEVGAEEIAEVVSRATGIPVSKMMQGEREK
LLKMEDKLHERVVGQDEAVRLVADAIRRSRAGLSDENRPYGSFLFLGPTGVGKTELCKTLANFLFDSEEHLIRIDMSEFM
EKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILFDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTS
NLGSQMIQAMAGDDYGVIKLAVMAEVKTYFRPEFINRIDEVVVFHALDEKHIAGIAKIQLQYLEKRLARLEMGMEISDAA
LAELATAGFDPVFGARPLKRAIQERIENPLAKAILEGRFAAKDCIRVDAEGGQLVFRRAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-105 42
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-95 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 1e-95 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmz1t_2646 YP_002889625.1 ATP-dependent chaperone ClpB VFG2076 Protein 5e-106 43