Gene Information

Name : Tmz1t_2530 (Tmz1t_2530)
Accession : YP_002889509.1
Strain : Thauera sp. MZ1T
Genome accession: NC_011662
Putative virulence/resistance : Virulence
Product : general secretory pathway protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 2729379 - 2730812 bp
Length : 1434 bp
Strand : +
Note : KEGG: eba:ebA4914 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: ATPase AAA

DNA sequence :
ATGGGTTTCGAGCTGCCCTACGGCTTCGCGCGCGACCACGGCGTGCTGGTCGCGGCCCTCGGCGCCGAACACGCCGAGGT
GCTGGTGCGCGAGGACGTTCGCCCGCAAGCGCTCGCCGAAGTGCGCCGCAGCCTCGGCCTGCCCCTGCGCCTGCAGCGCG
TGCCGCGCGCGCTCTTCGACGCCCGCCTCGCCGAGGCCTACGGCGGCGCCGGCGACAGTGCGGCGGAGATCGTCGCCGAC
GTCGGTCAGGAGGTCGACCTCGATCGCCTGATGACCGAGCTGCCCGCGGTCGAGGACCTGCTCGACACCCAGGACGACGC
GCCGATCATCCGCCTGATCAACGCCTTGCTCACCCAGGCGGTGCGCGACGGCGCCTCGGACGTGCACATCGAGCCCTACG
AGCGCGAGTCGGTGGTGCGCCTGCGCCGCGACGGCGTGCTGCGCGACATCGCCCGACCGCGCCGCGGCCTGCACGCGGCG
ATGGCCTCGCGCATCAAGATCATGGCGCAGCTCGACATCGCCGAGAAACGCCTGCCCCAGGACGGCCGCATCACCCTGCG
CCTGGCCGGGCGGGCGGTCGATGTGCGCGTGTCCACCGTACCGACCACCCACGGCGAACGCCTGGTGCTGCGCCTGCTCG
ACAAGCAGGCCGGGCAGATCGGCCTCGACGGCCTCGGCATGGCGCCCGACACCAGCGCCGTGTTCGCCGACCTGCTCGCC
CGGCCGCACGGCATCCTGCTCGTCACCGGCCCCACCGGCTCGGGCAAGACGACCACGCTGTACGCGGCGCTGCAAAGCCT
GGATGCCGGCCGCCTCAACATCGTCACGGTCGAGGATCCGGTGGAATTCGATCTGCCCGGGGTCGGCCAGATCCCGGTCA
ACCCGCGCATCGAGCTCGACTTCGCGCGCGCGCTGCGCGCCATCCTGCGCCAGGACCCGGACGTGATCATGATCGGCGAG
ATCCGCGACCTCGAGACCGCGCAGATCGCCATCCAGGCCAGCCTCACCGGCCACCTCGTGCTCGCCACCCTGCACACCAA
CGACAGCGCGGCCGCGCTCACCCGCCTGGTGGACATGGGCATCGAGCCCTTCCTGCTCGCCTCCACACTGCGCGGCGTGC
TCGCCCAGCGCCTGGTGCGCAAGCTCTGTCCCGACTGCCGCCAGCCCGCCGCGCCCGCCAGCACGACGCGGGGCTGGGAA
GCCGGCCAGTGCGCGCACTGCGGCCACAGCGGCTACCGCGGGCGTGCCGGCATCTACGAGCTGCTGGTGGTCGACGAGGG
CCTGCGCCGCCTGATCCACGACGGCGCCGACGAGGACCGCCTGCGCGCCCACGCGCGCGCCGCCGGCATGCACAGCCTGC
ACGAGGACGGCCTGCGCCACGTCGCCAGCGGGCTGACCAGCGCCGCCGAGCTGCAGCGCGTGATCCGCGCCTGA

Protein sequence :
MGFELPYGFARDHGVLVAALGAEHAEVLVREDVRPQALAEVRRSLGLPLRLQRVPRALFDARLAEAYGGAGDSAAEIVAD
VGQEVDLDRLMTELPAVEDLLDTQDDAPIIRLINALLTQAVRDGASDVHIEPYERESVVRLRRDGVLRDIARPRRGLHAA
MASRIKIMAQLDIAEKRLPQDGRITLRLAGRAVDVRVSTVPTTHGERLVLRLLDKQAGQIGLDGLGMAPDTSAVFADLLA
RPHGILLVTGPTGSGKTTTLYAALQSLDAGRLNIVTVEDPVEFDLPGVGQIPVNPRIELDFARALRAILRQDPDVIMIGE
IRDLETAQIAIQASLTGHLVLATLHTNDSAAALTRLVDMGIEPFLLASTLRGVLAQRLVRKLCPDCRQPAAPASTTRGWE
AGQCAHCGHSGYRGRAGIYELLVVDEGLRRLIHDGADEDRLRAHARAAGMHSLHEDGLRHVASGLTSAAELQRVIRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-106 51
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 1e-106 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmz1t_2530 YP_002889509.1 general secretory pathway protein E VFG0182 Protein 1e-112 52
Tmz1t_2530 YP_002889509.1 general secretory pathway protein E VFG1876 Protein 6e-114 51
Tmz1t_2530 YP_002889509.1 general secretory pathway protein E VFG2048 Protein 5e-107 50
Tmz1t_2530 YP_002889509.1 general secretory pathway protein E VFG2426 Protein 1e-74 49
Tmz1t_2530 YP_002889509.1 general secretory pathway protein E VFG0112 Protein 2e-84 45