Gene Information

Name : Tmz1t_2304 (Tmz1t_2304)
Accession : YP_002355939.1
Strain : Thauera sp. MZ1T
Genome accession: NC_011662
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 2594505 - 2595293 bp
Length : 789 bp
Strand : -
Note : PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: gdi:GDI0976 insertion sequence

DNA sequence :
ATGATCGATGCCGACCGACTCGACGAACTGCTCACCCGGCTGCGGCTCACGGCGATCCGCGACCAGCTCGACAGCCTGCT
CGACGAAGCCAGCCGGGCGCAGATGACACTGCGCGAAGCGCTGCTCTTCCTGGCCGAGCGCGAGGTCGCCCGGCGCGACA
CCCGACGCATCCAGATGGGCATGAAGCTCGCCCGTTTCCCGTGCGTGCGCACGCTCGAAGGCTTCGACTTCGACGCGCAG
CCCTCGATCGATCCAGGGCAGATCCGGGATCTGTCCTCCGGTCGCTGGATCGGGCACGGTCAGGCCCTGCTGCTGCTCGG
TCCGCCGGGCGTAGGCAAGACGCACCTGGCGGTCGCCCTCGGGCGCGAAGCGGTGGATCGCGGCTACACGGTGCTCTTCA
CCTCGGCAGCAGCGCTGATGGCCGGGCTCACGAAGGCGCACGCCGACGGACGGCTCGAGGAGAAGCTGCTGCAGCTCTCC
AAGCCCAAGCTGCTGATCATCGATGAGCTGGGCTACCTGCCGCTCGAGCCGGCCGCTGCGCACCTGTTCTTCCAGCTGGT
GTCGCGGCGCTACGAGCGGGCCAGCATGCTGATCACCAGCAACCGGCCCGTTGGCGAGTGGGGGCAGGTGTTCGGCGACG
CGGTGGCCGCTACCGCCATCCTCGACCGACTGCTGCACCACAGCCAGGTCATCACGATCCGGGGCGACAGCTACCGGCTG
CGCGACAAGCGCCGCAGCGGCCTTCTGCAGAAGGCCGCTGCCCCCACCCCGATCACGTCGGAGAGTTGA

Protein sequence :
MIDADRLDELLTRLRLTAIRDQLDSLLDEASRAQMTLREALLFLAEREVARRDTRRIQMGMKLARFPCVRTLEGFDFDAQ
PSIDPGQIRDLSSGRWIGHGQALLLLGPPGVGKTHLAVALGREAVDRGYTVLFTSAAALMAGLTKAHADGRLEEKLLQLS
KPKLLIIDELGYLPLEPAAAHLFFQLVSRRYERASMLITSNRPVGEWGQVFGDAVAATAILDRLLHHSQVITIRGDSYRL
RDKRRSGLLQKAAAPTPITSES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 4e-39 47
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 4e-44 47
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 4e-44 47
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 6e-44 47
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 4e-44 47
unnamed CAA21402.1 - Not tested HPI Protein 6e-44 47
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 4e-44 47
api84 CAF28558.1 putative transposase Not tested YAPI Protein 4e-44 47
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 4e-44 47
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 3e-43 47
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 5e-44 47
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 6e-44 47
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 6e-44 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmz1t_2304 YP_002355939.1 IstB domain-containing protein ATP-binding protein VFG1460 Protein 2e-39 47
Tmz1t_2304 YP_002355939.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 3e-44 47
Tmz1t_2304 YP_002355939.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 3e-44 47
Tmz1t_2304 YP_002355939.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 3e-44 47
Tmz1t_2304 YP_002355939.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 2e-43 47