Gene Information

Name : Tmz1t_0227 (Tmz1t_0227)
Accession : YP_002353918.1
Strain : Thauera sp. MZ1T
Genome accession: NC_011662
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator PhoB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 261493 - 262203 bp
Length : 711 bp
Strand : +
Note : KEGG: azo:azo0164 phosphate regulon transcriptional regulatory protein; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver

DNA sequence : 
ATGCCAGCGAACATATTGCTCGTGGAAGACGAGCCGGCGATCCAGGAGCTGATCGCGGCCAACCTCGCCCGCGCCGGCCA
CCACGTGGTGCGCGCCAACGACGCCGAGAGCGCGCAACGCATCGTGCGCGAGGCGCTGCCCGATCTGGTGCTGCTGGACT
GGATGCTGCCCGGCGCCTCGGGCGTCGAATTCGCCCGCCGGCTGCGTGCCGACGAGCGCACCCGCGACATCCCGATCATC
ATGCTGACCGCGCGCGGCGAGGAGCAGGACAAGGTCACCGCGCTCGAGGTCGGTGCCGACGACTACGTCACCAAGCCCTT
CAGCCCGCGCGAGCTGGTCGCGCGCATCAAGGCGGTGCTGCGCCGGCGTGCGCCGCAGACCACCGAGGACGTGGTCGAGC
TCGGCGGCCTGCGCCTGGACCCCGCCACCCACCGTGTCAGCGCGGGCGAGACCGCGCTCGCGCTCGGACCGACCGAGTTC
CGCCTGCTGCATTTCCTCATGACCCATCCCGAGCGCGTGCATTCGCGTGCGCAGCTGCTCGACCAGGTGTGGGGAGACCA
TGTCTTCGTCGAGGAGCGCACGGTGGATGTGCACATCCGCCGCCTGCGCTGCGCGCTCGAACCCAGCGCGCACGACGCGC
TGATCCAGACCGTGCGCGGCAGCGGCTATCGTTTTTCGGTGCACACCGCGCAAGCCGCGGCCGCCTCCTGA

Protein sequence : 
MPANILLVEDEPAIQELIAANLARAGHHVVRANDAESAQRIVREALPDLVLLDWMLPGASGVEFARRLRADERTRDIPII
MLTARGEEQDKVTALEVGADDYVTKPFSPRELVARIKAVLRRRAPQTTEDVVELGGLRLDPATHRVSAGETALALGPTEF
RLLHFLMTHPERVHSRAQLLDQVWGDHVFVEERTVDVHIRRLRCALEPSAHDALIQTVRGSGYRFSVHTAQAAAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 4e-33 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 7e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB HE999704.1.gene2815. Protein 9e-42 44
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB BAC0596 Protein 6e-37 44
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB CP001138.1.gene2239. Protein 6e-37 44
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB NC_010400.5986590.p0 Protein 2e-36 43
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB CP000034.1.gene2186. Protein 6e-36 43
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB NC_002695.1.916589.p Protein 6e-36 43
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB BAC0039 Protein 6e-36 43
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB NC_010410.6002989.p0 Protein 4e-36 42
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB NC_011595.7057856.p0 Protein 4e-36 42
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB NC_002952.2859905.p0 Protein 6e-40 42
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB NC_003923.1003749.p0 Protein 9e-40 42
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB NC_007622.3794472.p0 Protein 5e-40 42
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB NC_002745.1124361.p0 Protein 8e-40 42
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB NC_009782.5559369.p0 Protein 8e-40 42
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB NC_002951.3237708.p0 Protein 8e-40 42
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB NC_002758.1121668.p0 Protein 8e-40 42
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB NC_009641.5332272.p0 Protein 8e-40 42
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB NC_013450.8614421.p0 Protein 8e-40 42
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB NC_007793.3914279.p0 Protein 8e-40 42
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB CP001918.1.gene3444. Protein 1e-36 42
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB CP000647.1.gene2531. Protein 6e-37 42
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB AE015929.1.gene1106. Protein 8e-31 41
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB NC_012469.1.7686381. Protein 9e-39 41
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB CP000034.1.gene3671. Protein 5e-36 41
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB AE016830.1.gene1681. Protein 5e-39 41
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB NC_012469.1.7685629. Protein 1e-36 41
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB AE000516.2.gene3505. Protein 3e-32 41
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB CP001918.1.gene5135. Protein 9e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB VFG1563 Protein 2e-33 41
Tmz1t_0227 YP_002353918.1 winged helix family two component transcriptional regulator PhoB VFG1702 Protein 3e-33 41