Gene Information

Name : Tmz1t_2052 (Tmz1t_2052)
Accession : YP_002355696.1
Strain : Thauera sp. MZ1T
Genome accession: NC_011662
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2324243 - 2324971 bp
Length : 729 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: mgm:Mmc1_0545 transcriptional regulator

DNA sequence : 
ATGCAAGCGCCCCTCGAATCCCACGTCACCCTCTTGGTCGTCGACGACGATCTCGTCGCGCAGGCGCGCATGAATGCCTA
CTTTTCAAAGGAAGGCTACCGCGTGCTGCTGGCCGGCGACGGCGAGTCCTTCTGGCGACAGCTCGCCCAGGGAGAGGTCG
ACCTCGTGCTCCTCGACATCAACCTGCCCGGTCAGGACGGCTTGTCGTTGGCGCGCGAGCTGCGCGCGCGCGACGCCTCG
ATCGGCATCATCCTCGTCACCAGCCGCAACGACGACGTCGACAAGATCGTCGGGCTCGAGGTGGGCGCCGACGACTACGT
GACCAAGCCCTTCAACCCGCGCGAGCTGCTCGCCCGCGTCAAGAGCCTGCTGCGGCGCAGCGCGACGCGTCCGGCGGAGA
CGGCGGACAGCCTGCGCTTCGCGGGCTGGGTGCTGGAACTTTCGCGGCGCAGGCTGCGCGACCGCGCGGGGCAGGACGTG
GCGCTGACGCGCGGCGAATTCGAAGTGCTCGCGCTGCTGGTGCGCCACCCCGGCGAGATCCTCGACCGCGATCGCCTCAG
CCGCGCGGTGAGCGGGCACGACTGGTCGCCGCAGGACCGTTCGGTGGATGTGCTGGTGCGCCGCCTGCGCGCGAAGCTCG
ACGATCCGGCACGTACGGACTCGCTGATCGCAACGATCCGCGGCGAGGGCTATCGGCTGGCTGCCGACGTCGAGCCTGGC
GGGGTCTGA

Protein sequence : 
MQAPLESHVTLLVVDDDLVAQARMNAYFSKEGYRVLLAGDGESFWRQLAQGEVDLVLLDINLPGQDGLSLARELRARDAS
IGIILVTSRNDDVDKIVGLEVGADDYVTKPFNPRELLARVKSLLRRSATRPAETADSLRFAGWVLELSRRRLRDRAGQDV
ALTRGEFEVLALLVRHPGEILDRDRLSRAVSGHDWSPQDRSVDVLVRRLRAKLDDPARTDSLIATIRGEGYRLAADVEPG
GV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmz1t_2052 YP_002355696.1 winged helix family two component transcriptional regulator NC_008702.1.4607594. Protein 2e-35 44
Tmz1t_2052 YP_002355696.1 winged helix family two component transcriptional regulator BAC0197 Protein 9e-23 44
Tmz1t_2052 YP_002355696.1 winged helix family two component transcriptional regulator BAC0638 Protein 5e-16 42
Tmz1t_2052 YP_002355696.1 winged helix family two component transcriptional regulator CP000034.1.gene3671. Protein 4e-33 41
Tmz1t_2052 YP_002355696.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 1e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmz1t_2052 YP_002355696.1 winged helix family two component transcriptional regulator VFG0596 Protein 6e-20 41