Gene Information

Name : Tmz1t_2048 (Tmz1t_2048)
Accession : YP_002355692.1
Strain : Thauera sp. MZ1T
Genome accession: NC_011662
Putative virulence/resistance : Unknown
Product : alpha amylase catalytic subunit
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : -
Position : 2317393 - 2319111 bp
Length : 1719 bp
Strand : +
Note : PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: eba:ebA583 exo-alpha-1,4-glucosidase

DNA sequence :
ATGCCCCCCTCTGCAGCCCCCTCCGTCGGCCCGCAGCCGGTTTCGAGCCCCGCTGCCCCCTGGTGGAAATCCGCCGTCGC
CTACCAGCTCTACCCGCGCAGCTTCATGGACAGCGACGGCGACGGCATCGGCGACCTGCGCGGGATCCTCGCGCGGCTCG
ACTACCTGCAATGGCTGGGCGTCGATGTGATCTGGATTTGCCCGATCTTCGACTCCCCGAACGACGACAACGGCTACGAT
ATCCGCGACTACCGCAAGATCCTGTCGACCTTCGGCACCATGGAGGATTTCGACCGCCTGCTCGCCGAAGTCCACCGCCG
CGGCATGAGGCTGATCCTCGACCTGGTGCTCAACCACACCAGCGACGAGCACCCCTGGTTCCTCGAGTCGCGCGCCTCGC
CCGACAACCCCAAGCGCGACTGGTACATCTGGCGCGAGGGCCGCGACGGGCATCCGCCCAACAACTGGGAGAGCATCTTC
CGCGGCCCCGCGTGGGCCCGGGACCCGGCCACCGGGCAGTACTACCTGCACCTGTTCACCCGCCGCCAGCCCGACCTCGA
CTGGACCAATCCGGAGATGCGCGCGGCCTTCCACGACATCGTGCGCTGGTGGCTGGACAAGGGCATCGACGGCTTCCGCC
TCGATGCGGTGAGCCACATCCGCAAGATGCCGGGCCTGCCCGACCTGCCCAATCCGCGCGGCCTGCCCTGGGTGCCGTCC
TTCGCCATGCACATGAACGTCGACGGCGTGCTCGACACCATCGGCGAGCTCTGCCGCGAGACCTTCCGCCGCTACGACGT
GATGACCGTGGGCGAGGCCAACGGCGTCGGCCCGCGCGAGGCGGTGGAGTGGGTGGGCAGCGACCGCGGCCGGCTCGACA
TGATCTTCCAGTTCGAGCACCTGGCGCTGTGGTCGCGCGCGCCCGGCGCGCCGCTCGACGTGGTCGCGCTCAAGAAGGTG
CTGTCGCGCTGGCAGCATGCGCTGCACGGCAAGGGCTGGAACGCGCTCTTCCTGGAGAACCACGACATCCCCCGCGTCGT
CTCCAAGTGGGGCGACACCGGCGCGCTGTGGCGCGAGAGCGCGACCGCGCTGGCGACGATGTACTTCCTGATGGAGGGCA
CGCCCTTCATCTACCAGGGCCAGGAGATCGGCATGACCAACGGCGTCTTCGAGCGCATCGAGGACTTCGACGACGTGCTG
GCGAAGAACGACTACGCGCAGCGCCGCCTGGCCGGCGAGGAGGAGGGCGCGATCGTCGCCGACCTCGTGCTCACCGGCCG
CGACCCGGCGCGCACGCCGATGCAGTGGGACGACGGCCCTCAGGCGGGCTTCACGCGCGGACGGCCGTGGCTGGCGGTCA
ATCCCAACCATCGCCGCATCAACGTCGCCCAGCAGCGCCACGACCCGGCTTCGGTGCTCAACCACTACCGCCGCCTGATC
GCGCTGCGCAAGGCCGAGCCGGCGCTGGTGCTCGGCGACTATCGCCTGCTGATGAAGGACGACGCGCAGATCTACGCCTA
CCAGCGCCGGCTGGACGGCGAGCGCATTGCGGTGATCGTCAACCTGAGCCCTCGCCCGGCGCGCTTCGATCATCCCGGCG
TGGTGCTCCGCCACGAACGCCTGCTGCTCGCCAACCGCGCCGTCGAAGCGCACCCTGCCGCCCACGCGCTCGAGCTCGCA
CCCTACGAGGCCCGCGTATACCGCGTGGGAAAAATGTAG

Protein sequence :
MPPSAAPSVGPQPVSSPAAPWWKSAVAYQLYPRSFMDSDGDGIGDLRGILARLDYLQWLGVDVIWICPIFDSPNDDNGYD
IRDYRKILSTFGTMEDFDRLLAEVHRRGMRLILDLVLNHTSDEHPWFLESRASPDNPKRDWYIWREGRDGHPPNNWESIF
RGPAWARDPATGQYYLHLFTRRQPDLDWTNPEMRAAFHDIVRWWLDKGIDGFRLDAVSHIRKMPGLPDLPNPRGLPWVPS
FAMHMNVDGVLDTIGELCRETFRRYDVMTVGEANGVGPREAVEWVGSDRGRLDMIFQFEHLALWSRAPGAPLDVVALKKV
LSRWQHALHGKGWNALFLENHDIPRVVSKWGDTGALWRESATALATMYFLMEGTPFIYQGQEIGMTNGVFERIEDFDDVL
AKNDYAQRRLAGEEEGAIVADLVLTGRDPARTPMQWDDGPQAGFTRGRPWLAVNPNHRRINVAQQRHDPASVLNHYRRLI
ALRKAEPALVLGDYRLLMKDDAQIYAYQRRLDGERIAVIVNLSPRPARFDHPGVVLRHERLLLANRAVEAHPAAHALELA
PYEARVYRVGKM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 2e-111 44