Gene Information

Name : Tmz1t_1421 (Tmz1t_1421)
Accession : YP_002355076.1
Strain : Thauera sp. MZ1T
Genome accession: NC_011662
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1584095 - 1584787 bp
Length : 693 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: azo:azo0975 two-component response regulatory protein

DNA sequence : 
ATGCGTATCCTGTTGGCGGAAGACGATCCGGTGATCGCCGACGGCATCTGTCGCGCCCTGCGGCGCGGTGGTTGTGCAGT
CGATCACGTGGCGGACGGCATGGAGGCGGATGCCGCGCTCGCGGGCCAGGGTTACGACCTGCTCATCCTCGACCTCGGCC
TGCCGCGCATGAACGGCATCGAGGTGCTCAAGCGCCTGCGCGCGCGCAAGTCGGCTCAGCCGGTGCTGATCCTGACCGCG
CAGGATGGCGTCGACGACCGCGTGCGCGGGCTCGATGCCGGTGCCGACGACTACCTCACCAAGCCTTTCGCCCTGCCCGA
ACTGGAAGCGCGCGTGCGTGCGCTTACCCGCCGCGGCACCGGCCAGCCGCGCTGCATCGAGATCGGTCAGCTGAGCTACG
ACCAGGCCGACCGCGTGGTCAAGATCGGCGGCCAGCTCGTCGAGCTGTCGGCGCGCGAGATCGGCCTGCTCGAGATCTTC
CTGCTGCGTGTCGGCCGCCTGGTCAGCAAGGACCAGCTCGTTGACCACCTGTGCGGCTGGGGCGAGGAGGTGTCCAGCAA
CGCGATCGAGGTCTATGTCCATCGCCTGCGCAAGAAGCTCGAGGACAGCGGCGTGCGCATCGTGACCGTGCGCGGCCTGG
GGTACTGCCTGGAAAACCCCGATGCTGCCCCTGCGGCGAAAGTCCAGGCCTGA

Protein sequence : 
MRILLAEDDPVIADGICRALRRGGCAVDHVADGMEADAALAGQGYDLLILDLGLPRMNGIEVLKRLRARKSAQPVLILTA
QDGVDDRVRGLDAGADDYLTKPFALPELEARVRALTRRGTGQPRCIEIGQLSYDQADRVVKIGGQLVELSAREIGLLEIF
LLRVGRLVSKDQLVDHLCGWGEEVSSNAIEVYVHRLRKKLEDSGVRIVTVRGLGYCLENPDAAPAAKVQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 7e-38 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmz1t_1421 YP_002355076.1 winged helix family two component transcriptional regulator BAC0083 Protein 8e-37 44
Tmz1t_1421 YP_002355076.1 winged helix family two component transcriptional regulator BAC0487 Protein 5e-37 43
Tmz1t_1421 YP_002355076.1 winged helix family two component transcriptional regulator BAC0638 Protein 7e-31 43
Tmz1t_1421 YP_002355076.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 3e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmz1t_1421 YP_002355076.1 winged helix family two component transcriptional regulator VFG0473 Protein 2e-39 42