Gene Information

Name : Tmz1t_1082 (Tmz1t_1082)
Accession : YP_002354739.1
Strain : Thauera sp. MZ1T
Genome accession: NC_011662
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 1180116 - 1180892 bp
Length : 777 bp
Strand : +
Note : PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: mms:mma_2801 transposase

DNA sequence :
ATGAATCCCGCCCAACTCGAACGCCTGGCCGATCACCTGACCAAGCTGCGCCTGTTCAAGAGCCGTGAGCGGCTCGAGGC
CTTGCTGCAGCAGGCCGCCGCCGAGGACATGGCTTATGCCGATTTCCTCGAGCAGGTGCTCGCCGAGGAGGTTGCCGCCA
AGACCAGCAAGAACGTCACCATGCGCACGGCGATGGCGCGCTTTCCCTTCGTCAAGCCGCTGGAGACCTTCGACTTCGCC
TACCAGCCCTCGATCGACAAGAAGCAGGTGCACACGCTGGCCATGTGCCACTTCATCGAGCACGGCGACAACGTGCTCGT
GCTCGGACCGCCGGGCGTGGGTAAGACGCATCTGGCGGTCGCGCTCGGCCTGAAAGCGATCGAGGCCGGCTACCGTGTGC
TCTTCACCACCGCCGCCAGCCTGATCGCGGCACTTACCAAGGCCCATGCCGAGGGGCGCCTCGACGAGAAGCTCAAGATC
TACACCACGCCCCGTCTGCTGATCATCGACGAGATCGGCTACCTGCCGATCGAGCGTCAGGGCGCAAACCTGTTCTTCCA
GTTGATCAGCCGCCGTTACGAGCGCGGACCGATGATCCTGACCAGCAACCAGAGCTTCGGCGCCTGGGGCGAGGTGTTCG
GCGACCGCGTCATCGCCACCGCGATCCTCGACCGGCTACTGCATCACGCCGTCACGTTGAACATTCGCGGTAACTCGTAC
CGGCTGAAAGAGAAGTTGAAAGCCGGCCTCGTCCGTCCGGAAGAGGCTGAGGCTTGA

Protein sequence :
MNPAQLERLADHLTKLRLFKSRERLEALLQQAAAEDMAYADFLEQVLAEEVAAKTSKNVTMRTAMARFPFVKPLETFDFA
YQPSIDKKQVHTLAMCHFIEHGDNVLVLGPPGVGKTHLAVALGLKAIEAGYRVLFTTAASLIAALTKAHAEGRLDEKLKI
YTTPRLLIIDEIGYLPIERQGANLFFQLISRRYERGPMILTSNQSFGAWGEVFGDRVIATAILDRLLHHAVTLNIRGNSY
RLKEKLKAGLVRPEEAEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 2e-42 49
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 2e-50 49
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 3e-51 49
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 3e-51 49
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 4e-51 49
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 3e-51 49
unnamed CAA21402.1 - Not tested HPI Protein 4e-51 49
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 3e-51 49
api84 CAF28558.1 putative transposase Not tested YAPI Protein 3e-51 49
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 3e-51 49
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 4e-51 49
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 4e-51 49
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 3e-51 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmz1t_1082 YP_002354739.1 IstB domain-containing protein ATP-binding protein VFG1460 Protein 1e-42 49
Tmz1t_1082 YP_002354739.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 9e-51 49
Tmz1t_1082 YP_002354739.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 2e-51 49
Tmz1t_1082 YP_002354739.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 2e-51 49
Tmz1t_1082 YP_002354739.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 2e-51 49