Gene Information

Name : Dtur_0899 (Dtur_0899)
Accession : YP_002352794.1
Strain : Dictyoglomus turgidum DSM 6724
Genome accession: NC_011661
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 931061 - 933745 bp
Length : 2685 bp
Strand : +
Note : PFAM: ATPase AAA; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA; SMART: ATPase AAA; KEGG: dth:DICTH_0749 ATPase, AAA family

DNA sequence :
ATGAGCAGAAAATTATGTGACATCTGTGGGATCAACCCTGCGACTATTAGGGTCTACACCATAAAAAATGGACAAAAGAG
AGTCCTTGATATATGTGAAGAATGTTATGCTAAGCAAAGGAGACAAGAAAGGTCATATTCTCCTTTGGAATCTTTATTCT
TTGGTGATCTTTTTAGGGACTTTTTTGGAGAGGATATTGGTTTTCCCTTTGAAAGTCCTTTTGGAAGAGAAAGGGAATCT
ATAGATTTGAATGATTATTTGAGCAATGTATCAAAAGATCTTCTCCAACAAGCTGCCAAAAAAGCTATTGATTTTGGCAA
GAAACAAGTTGGAACCGAACATTTGCTCTATGTTCTCTTGGACAATGATGTGGTAAATGAGATTTTAAAACAATTTAAAG
TTTCACCACAAGAGATCAAAGCCTATATAGATAATAATGCTCCTAAGGGTGGGTTTAAGCCTGAAGGAGAAGAGGTGGAG
GTAGACATATCTCCAAGGCTAAAAAGTGCTTTAGAGAGAGCTTTTATGGCTGCAAGAGACTTAGAGCATAACTACATAGG
TCCAGAACATCTCTTGATAGGGCTTGCAGAAGAAGAGGAAGGATTTGCTGCAAATGTTTTAAGAAAGTATGGACTAAATC
CCCAGGCATTGAGACAAGCAACTATTAGAGTAGTAGGAAGAGGTAAAGAGGCTGGCAAAGGAGTTAGAAGATCTAATACC
CCTACTCTTGATAAATTTTCTCGTGATTTAACGGAATTAGCGAGACAAGGTAAATTAGATCCTGTCATAGGAAGGGCAAA
AGAGATAGAAACTGTTATTGAGGTACTTGCAAGAAGAAAGAAGAATAACCCTGTGCTCATAGGAGAGCCAGGTGTAGGTA
AGACTGCTATTGTAGAGGGTCTTGCTCAAAGGATTGTTAAAGGAGAAGTACCAGAAGTTTTAAGAGATAAGAGATTAGTA
GAATTAAACATAAATACCCTTGTGGCAGGGACAAAATATAGAGGAGAGTTAGAGGAAAGAGTAAAGCAGATTTTAGATGA
GATAATAGCTAATCAGGATAATTTGATCATCTTTATTGATGAGATTCACACTATTGTGGGAGCAGGTGCTGCTGGAGAAG
GAAATTTAGATATTGCTAATGCTTTTAAACCAGCATTAGCAAGGGGAGAACTCCATTTAATTGGCGCTACCACTTTGAAT
GAGTATCAAAAATATATTGAAAAAGATCCTGCCCTTGAAAGAAGATTTCAACCTATATTTATCTCTGAGCCTACTGTAGA
GCAGACTATAACAATCTTAAGAGGGTTAAGGGATAGATTTGAAGCACATCATAAAGTAAAGATTACTGACGAGGCAATAA
TAGCTGCTGCTGAACTCTCAGATAAGTATATAACAAATAGATACTTGCCTGATAAGGCTATAGATCTTATAGATCAAGCA
GCAGCAAGGGTAAGAATTATGATGACTTCAAGGCCTGCCGAGATACAGGAACTTGAAGCCAAAATACAGTCTTTGAAGAG
AGAGCAGGAATATGCATCCTCTAGAAAGCAGTATGATAAAGCTAAAGAACTTGAGGAGCAAATTCAGAAACTTGAGAAAG
AATTGCAAGAAAAGACTGAAACTTGGAAGAGAGAAATTGCATCTGATGTACCTGAGGTAAGAGCTAAGCATATAGCCGAA
ATAGTATCCTCTCTTACAGGTATTCCTGTAACAGAGCTTACCACTGATGAAAGAGAAAGACTATTAAAGCTTGAAGAAAA
ATTACATGAAAGAGTGGTAGGGCAGGATGAAGCTATAAAGGCAGTGAGTGATGCTATAAGATTAGCAAGAGCAGGTCTCA
GGGAGAAGAATAGGCCCATAGCTACTTTCTTATTCCTTGGTCCTACAGGGGTAGGTAAGACAGAACTGGCGAGAGCTCTT
GCTTGGGCAGTATTTGGAGATGAGGATGCTATCATACGTATTGATATGAGTGAGTATATGGAGAGACATACTGTTTCAAG
ATTAATTGGTGCTCCTCCAGGATATGTAGGATATGAAGAAGGTGGACAACTTACTGAAAAGGTACGTAGAAGACCATATA
GTGTAATTCTCTTAGACGAAATAGAGAAAGCTCATCCAGATGTGCATAATATACTATTACAGGTATTCGACGCAGGAAGA
CTTACCGATGGGAAAGGTAGAGTTGTAGATTTTACCAATACCATAATTATAATGACAAGTAATATAGGATCTGACATTAT
CCAGGCTAATTTGTCAGCTGCTGGAAGGGATAAGTTAAGCTATGAACAGCTTAAAGAAAAACTTATGGATATTCTTAAGA
GGTACTTTAGACCAGAATTTCTCAATAGGATTGATGAGATAATAGTGTTCCATGCTTTGACTAAAGAACAAGTGAGAGAC
ATTGTCAAATTGCAGCTTGAAAGGGTAAGAAGAACTGCAAGGGCTCAAAATATAGAGCTCATATTTGATGAATCAGTGGT
AGATTTTCTTGCTGATATAGGATATAGTCCTGAGTTTGGAGCAAGAGAACTTAAGAGAAAAATTAGAAATGAACTTGAAA
CAAAACTTGCTAAGGCTATGCTTGAGGGAGCAGTTCAAGAGGGCGATAAAATTATGGTAAGATATAATAAAGAAAAAAAT
ACTATTGAATTTGAAAAAATAGCTGAAGAGGTTAAAGCAAATTAA

Protein sequence :
MSRKLCDICGINPATIRVYTIKNGQKRVLDICEECYAKQRRQERSYSPLESLFFGDLFRDFFGEDIGFPFESPFGRERES
IDLNDYLSNVSKDLLQQAAKKAIDFGKKQVGTEHLLYVLLDNDVVNEILKQFKVSPQEIKAYIDNNAPKGGFKPEGEEVE
VDISPRLKSALERAFMAARDLEHNYIGPEHLLIGLAEEEEGFAANVLRKYGLNPQALRQATIRVVGRGKEAGKGVRRSNT
PTLDKFSRDLTELARQGKLDPVIGRAKEIETVIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRIVKGEVPEVLRDKRLV
ELNINTLVAGTKYRGELEERVKQILDEIIANQDNLIIFIDEIHTIVGAGAAGEGNLDIANAFKPALARGELHLIGATTLN
EYQKYIEKDPALERRFQPIFISEPTVEQTITILRGLRDRFEAHHKVKITDEAIIAAAELSDKYITNRYLPDKAIDLIDQA
AARVRIMMTSRPAEIQELEAKIQSLKREQEYASSRKQYDKAKELEEQIQKLEKELQEKTETWKREIASDVPEVRAKHIAE
IVSSLTGIPVTELTTDERERLLKLEEKLHERVVGQDEAIKAVSDAIRLARAGLREKNRPIATFLFLGPTGVGKTELARAL
AWAVFGDEDAIIRIDMSEYMERHTVSRLIGAPPGYVGYEEGGQLTEKVRRRPYSVILLDEIEKAHPDVHNILLQVFDAGR
LTDGKGRVVDFTNTIIIMTSNIGSDIIQANLSAAGRDKLSYEQLKEKLMDILKRYFRPEFLNRIDEIIVFHALTKEQVRD
IVKLQLERVRRTARAQNIELIFDESVVDFLADIGYSPEFGARELKRKIRNELETKLAKAMLEGAVQEGDKIMVRYNKEKN
TIEFEKIAEEVKAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-165 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dtur_0899 YP_002352794.1 ATPase VFG0079 Protein 3e-178 56
Dtur_0899 YP_002352794.1 ATPase VFG0080 Protein 4e-140 47