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Name : Dtur_0573 (Dtur_0573) Accession : YP_002352476.1 Strain : Dictyoglomus turgidum DSM 6724 Genome accession: NC_011661 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 573911 - 575812 bp Length : 1902 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; CoA-binding domain protein; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domai DNA sequence : ATGTTTTTGAGGAGAAGAAATTTATTTAAGATACCACGTTCAACAATATTTAGGATATTTGTAGATTTTGCATTTTTTAT TCTATCTATTTATTTTTCCTTTTTGTTAAGGTTTGAATTTATACCTCCTTCTAATTATATTAAAATACTACCTCTTGTTA TATTTAGAGAATTTCTTATTTTCTTTATTATTTATTTCTTTGCTTTTAAGCTCTATCGCACTTTATGGGAATATTTTAGC CTTGAAGCCCTGAAAGAGTTGACCCTTGCGATTACACTTGAAAAAATAATATTTTATTTATCTTATTTAATTTTTCCAAT TCAAGGACTTCCAAGATCAATAATTCTCATCTCTTACTTTACGTCTCTTTTACTTTTATTCTCAGTAAGGGCTTTTACTC GCTGGGTTTACGAGAGTAAAAAGAGTATAGATAAAGTTAATTATGCTCAAAAAAAGAGAGTAGTTATTATTGGAGCTGGT GATGCTGGAGAAAAGATATTAAGAGAGATAAAGACACATAAAAACCTAAATTATGATGTGGTAGGATTTTTGGATGATGA TCCTAAAAAAATTGGAAAAACAATTCATGGAATTAAAATATTAGGACCTATATCTTCTTTGCACAAAGTTGTTAGGGGGA ATGGAGTTCAGGAAATTCTTGTTGCAATTCCTTCTGCACCTCCTTCGCTTTTGAAAAATATTTTGAGTATGGCTTCTAAG TTGAAACTTCCTGTAAAAACCCTTCCTGGAATATGGGAGCTTATAGATGGGAAAGTGACCATAAGTAAAATTAGGGACGT AAAGATAGAAGATCTTCTTGAAAGGGACGTTATAGATTTGGATTCTGAAAAAATAGGTGAATACTTAAGAGGAAAAAAAG TACTTGTTACTGGAGCTGGAGGATCTATTGGGGCGGAAATTTGTAGGCAGGTTGCAAGATATGGACCACAAAAACTTATT CTTCTGGGAAGAGGAGAAAATAGCATATTTAATATTGAATTAGAACTTAAGAATACTTACCCTAATTTAAATATCTGCTC TTATATTGCAGATATAAAGGATAGAGATAGGATATTTTACATATTTTCCATGGAAAAACCTGAGATAGTCTTTCACTCTG CTGCCCATAAACATGTGCCTTTAATGGAGGAAAATCCTGACGAAGCGGTGTTTAACAATGTTTTTGGTACCATTAATGTA ATGGATGCTTCAAAAGAATATGGAGTAAAAAAATTTATCTTTATTTCTACCGATAAAGCAGTGTATCCAGCAAATATAAT GGGTGCGACAAAAAGAGTTGGAGAAATGTTAGTAAGGTATTATAATTCTCACTCTCAAACGGAGTATATAGCAGTAAGAT TTGGAAATGTCTTAGGAAGTAGGGGAAGCGTCCTTGAAGTATTTAAAAAACAGATTGAAATGGGCGGTCCTATCACTATA ACCCATAAGGATATGGAAAGATATTTCATGACAATACCCGAGGCGGTAGGACTTGTGCTTCAGGCAGGGGCTATTGGGAA ATCGGGTGATCTTTTTGTTCTTGATATGGGAAAGCCAGTTAAAATTATAGATCTTGCAAAAAACTTTATAGAGCTTTCTG GATATTCGGTGGAAGATATAGAGATAAAGATTATAGGTCTTCGCCCTGGAGAAAAGTTAAAGGAGGAACTTTGGGAGGAA GAGGAAAAGGTTCTAAAAACCTCGCATCCTAAAATATATAAAATAATTTCTAACAATGATCTTGATAAAAATAGTTTTGA AGCATTACTGAGAGAGCTAAAGCTTTCTGCTGAAAAAAGGGATAAAAATGAGATTGAAAAAGTGCTTAAAAAGTTAATTC CTACTTATAAAAAAGCTCAAGAAAATGCAAAAGGGAAAGAACAATGGGAAGCTTTAAAGTAA Protein sequence : MFLRRRNLFKIPRSTIFRIFVDFAFFILSIYFSFLLRFEFIPPSNYIKILPLVIFREFLIFFIIYFFAFKLYRTLWEYFS LEALKELTLAITLEKIIFYLSYLIFPIQGLPRSIILISYFTSLLLLFSVRAFTRWVYESKKSIDKVNYAQKKRVVIIGAG DAGEKILREIKTHKNLNYDVVGFLDDDPKKIGKTIHGIKILGPISSLHKVVRGNGVQEILVAIPSAPPSLLKNILSMASK LKLPVKTLPGIWELIDGKVTISKIRDVKIEDLLERDVIDLDSEKIGEYLRGKKVLVTGAGGSIGAEICRQVARYGPQKLI LLGRGENSIFNIELELKNTYPNLNICSYIADIKDRDRIFYIFSMEKPEIVFHSAAHKHVPLMEENPDEAVFNNVFGTINV MDASKEYGVKKFIFISTDKAVYPANIMGATKRVGEMLVRYYNSHSQTEYIAVRFGNVLGSRGSVLEVFKKQIEMGGPITI THKDMERYFMTIPEAVGLVLQAGAIGKSGDLFVLDMGKPVKIIDLAKNFIELSGYSVEDIEIKIIGLRPGEKLKEELWEE EEKVLKTSHPKIYKIISNNDLDKNSFEALLRELKLSAEKRDKNEIEKVLKKLIPTYKKAQENAKGKEQWEALK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-80 | 45 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 6e-82 | 44 |
