Gene Information

Name : Dtur_0390 (Dtur_0390)
Accession : YP_002352308.1
Strain : Dictyoglomus turgidum DSM 6724
Genome accession: NC_011661
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 395188 - 395886 bp
Length : 699 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0121 ABC transporter, ATP-binding protein

DNA sequence : 
ATGTTCATCGAAATCAAGGATCTTTCAAAAAGTTATCAGGTTGGTTTAACTAAGATTGATGCCCTCAAAAAGTTATCCAT
AGACTTTGAAAAGGGCAAGATGTATGTAATCCTTGGACCTTCTGGCTCTGGAAAAACCACTCTTCTTAACATTCTTGGTG
GAATTGATAAACCCGACGAAGGAAAAGTTATAGTTGATGGGGAGGATATAACTAACTATAACGATAGGGAGCTAACTAAT
TATCGAAGGAGAAAACTTGGCTTCATTTTTCAGTTTTACAATCTTGTGAACTCTTTGACAGTCCTTGAAAATGTACTTTC
CACTAAATACCTTTCAGAAAATGGTTTAGATCCTAAGGAAGTTCTTGAAGTTGTGGGAATGTGGGAGCATAGAGATAAAT
TTCCTTTTGAACTTTCGGGTGGTGAACAGCAAAGGGTAGCTATAGCAAGGGCAGTAGTGAAAAATCCATCTATAATACTT
TGTGATGAGCCAACAGGTGCTCTTGATTTTGAAAATGCAAAGAGGGTACTAAAGCTTCTTGAGGATATTAATAAAAGGTA
TGGTACTACTATTATAATTGCAACTCATAATACTGCTATTGCAAAAATGTCCCATAAGATTATAAGGCTAAGAAGTGGAG
AATTGGTGGAGTACCAAGACAATCCATCTCCAGCTCTTGCTGAGGAGGTGGTTTGGTAA

Protein sequence : 
MFIEIKDLSKSYQVGLTKIDALKKLSIDFEKGKMYVILGPSGSGKTTLLNILGGIDKPDEGKVIVDGEDITNYNDRELTN
YRRRKLGFIFQFYNLVNSLTVLENVLSTKYLSENGLDPKEVLEVVGMWEHRDKFPFELSGGEQQRVAIARAVVKNPSIIL
CDEPTGALDFENAKRVLKLLEDINKRYGTTIIIATHNTAIAKMSHKIIRLRSGELVEYQDNPSPALAEEVVW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-29 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 45
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dtur_0390 YP_002352308.1 ABC transporter NC_012469.1.7685735. Protein 6e-46 50
Dtur_0390 YP_002352308.1 ABC transporter CP001581.1.gene798.p Protein 3e-36 44
Dtur_0390 YP_002352308.1 ABC transporter CP001581.1.gene598.p Protein 1e-31 41
Dtur_0390 YP_002352308.1 ABC transporter NC_008702.1.4606598. Protein 2e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dtur_0390 YP_002352308.1 ABC transporter VFG0869 Protein 7e-17 42