Gene Information

Name : Dtur_1480 (Dtur_1480)
Accession : YP_002353368.1
Strain : Dictyoglomus turgidum DSM 6724
Genome accession: NC_011661
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1489927 - 1492398 bp
Length : 2472 bp
Strand : -
Note : PFAM: UvrB/UvrC protein; ATPase AAA; Clp domain protein; Torsin; ATPase associated with various cellular activities AAA_5; ATPase AAA; SMART: ATPase AAA; KEGG: dth:DICTH_1370 negative regulator of genetic competence ClpC/MecB

DNA sequence :
ATGATGGATAAACTAACACAAAGGGCATATAGAGTACTACTCTTAGCACAGGAGGAAGCACGTAGGCTTAATTATTCTAC
GGTGGGGACAGAACATATTCTCCTGGGGTTGATACGTGAGGAGGGAGGTATAGCAGCTCAAGTCCTTATTAATTTAGGAC
TTGATCTGAATCAGCTCAGGAATGAGATAGAGAGATTGATAGGTCGTGGAGATGGTACCTCCTATGGAGCACTTCCCTTC
ACTTCAAGAGCAAAGAAGGTTCTGGAATATGCTTCTGAATCGGCTCAGGAACTTAATCATAACTATATTGGAACTGAGCA
TTTGCTTCTTGGACTGTTGAAGGAAGGTGAAGGTGTAGCAGCTCATGTTTTGGAGGGAATGGGAGTAAGATTAGAAGATG
TTACTATAGAGATATTAAAACTTCTTGGTGAGCCTATAGATCCAACTAAGATAAGAGGCAGACAACAAATGAATACTTCT
AATAATAACTCCTTAAAGAAAAAGAGAACAGTAACAGCTACCTTGGATGAGTTTGGTCGAGATCTAACTCAACTTGCAAG
GCAAGGCAAATTGGATCCTATTATTGGGAGAGAAAAAGAGTTAGAGAGGATAATTCAAATACTGAGTAGAAGGACTAAAA
ATAATCCTGTTCTTGTGGGAGAACCTGGTGTTGGTAAGACCGCTATAGTAGAGGGTCTTGCTCAAAAGATAGTAGATGGT
GAAGTACCTGATACTTTGTTAAATAAAAGGATCGTTGCTATTGATATGGGAAGTATCGTGGCTGGTACAAAATATAGGGG
TGAGTTTGAAGAGAGAATGCAAAGGATCATTGAGGAAGTTAAGATGGCAAAAGATGTCATCCTTTTTATAGATGAGATTC
ATACCTTGGTTGGGGCAGGAGCAGCAGAAGGAGCGGTTGATGCAGCAAATATTTTGAAACCCTCTCTTGCAAAGGGTGAG
ATACAATTAATTGGTGCTACAACCCCATCAGAATATAGGAAGTATATTGAGAAAGATGGGGCATTAGAAAGAAGATTTCA
GCCTATAATGGTTAACGAGCCTACACCTGAAGAGACTATACAGATATTGAAAGGTTTAAGAGAAAAATACGAAAATTATC
ATAGAGTTAAAATTACCGATGAGGCTATAGAAGAAGCAGTCAAATTGTCAGTTAGATATATAACCGATAGATTCTTGCCT
GATAAGGCGATAGATGTAATAGATGAAGCTTCAGCGAGGGTAAGATTGAGAAAACAAAAGAGCACAGTGCATAGTAATTT
AGAACTTGAACTCGCGAGAATAAGAGAACAAAAGGAGATTGCTATAAGAAATCAAGCGTTTGAAAGAGCAGCTCAGTTAA
GAGATGAAGAAAGAAAGATTGAAGAGTATCTTAGAAATTTCATAGATACATCTTCTCCTTCTGATCTTGGAGTTGTAACT
CCTGAAGATGTGGCTCAAGTAGTGGCTACTTGGACTGGAATACCTGTAGCTCAACTTCTAATTGAAGAAAGAGAAAGGCT
ATTAAGAATGGAAGAAGAGCTTCATAAGAGAATAATTTCTCAGGATGAGGCTGTAAGGGTGGTCTCAAGGGCTATAAGAA
GATCAAGATCTGGTTTGAAGGATCCAAGAAGACCTATAGGTGTGTTTATGTTCTTAGGACCAACAGGGGTTGGAAAGACT
GAGCTTGCAAGGGCACTTGCAGAGTACCTCTTTGGAAATGAGAATGCTTTAATTAGGTTTGATATGTCAGAGTTTATGGA
GAAGCATACTGTTTCAAGGTTAATTGGTGCTCCTCCTGGATATGTGGGATACGAGGAAGGAGGACAACTTACTGAAAAAG
TTCATAGGAGACCTTATTCTGTTATTCTCTTTGATGAGATAGAAAAGGCTCATAGTGATGTATTTAATATCCTTTTGCAA
ATAATGGACGAAGGACAACTTACCGATGGTCATGGTAGAAGAGTAAGTTTTAAGAATACTATCTTGATAATGACTTCAAA
CTTTGGAGCAGAGTATTTTAAGCAAGAGGCAAGTATAGGGTTTGCTTCTAAAGAGGATAGGGAAAAGTCTTTTGATAAAA
TTAAAGATTTAATTTTGAGTGAGATGAAGAAGTACTTTAGACCAGAGTTCTTGAATAGGCTTGATGAGATTGTATTCTTC
AAGCCACTTACCAAGGAAGATTTGAAGCAAATTTTAGAATTATTACTCAAACCAGTCCAGGAGAGGATAAGAGAAAAGAA
GTTGGAATTAGAAATAAGTGATGAGGTAAAAGAACTATTACTTGAGAAAGGATATGATCCTCAGTATGGAGCAAGACCTT
TAAAGAGAACTATTCAATACTATATTGAAGATCCATTAGCTGAATTTATACTTCAAGGGGATTTTAAAGAGGGAGATATT
ATAAGAGCAGAACTTGATAAAAAGGGAGAAATAGTGTTTAGAAAGATGACTCTTGCGAAGGAGCCTTCATAG

Protein sequence :
MMDKLTQRAYRVLLLAQEEARRLNYSTVGTEHILLGLIREEGGIAAQVLINLGLDLNQLRNEIERLIGRGDGTSYGALPF
TSRAKKVLEYASESAQELNHNYIGTEHLLLGLLKEGEGVAAHVLEGMGVRLEDVTIEILKLLGEPIDPTKIRGRQQMNTS
NNNSLKKKRTVTATLDEFGRDLTQLARQGKLDPIIGREKELERIIQILSRRTKNNPVLVGEPGVGKTAIVEGLAQKIVDG
EVPDTLLNKRIVAIDMGSIVAGTKYRGEFEERMQRIIEEVKMAKDVILFIDEIHTLVGAGAAEGAVDAANILKPSLAKGE
IQLIGATTPSEYRKYIEKDGALERRFQPIMVNEPTPEETIQILKGLREKYENYHRVKITDEAIEEAVKLSVRYITDRFLP
DKAIDVIDEASARVRLRKQKSTVHSNLELELARIREQKEIAIRNQAFERAAQLRDEERKIEEYLRNFIDTSSPSDLGVVT
PEDVAQVVATWTGIPVAQLLIEERERLLRMEEELHKRIISQDEAVRVVSRAIRRSRSGLKDPRRPIGVFMFLGPTGVGKT
ELARALAEYLFGNENALIRFDMSEFMEKHTVSRLIGAPPGYVGYEEGGQLTEKVHRRPYSVILFDEIEKAHSDVFNILLQ
IMDEGQLTDGHGRRVSFKNTILIMTSNFGAEYFKQEASIGFASKEDREKSFDKIKDLILSEMKKYFRPEFLNRLDEIVFF
KPLTKEDLKQILELLLKPVQERIREKKLELEISDEVKELLLEKGYDPQYGARPLKRTIQYYIEDPLAEFILQGDFKEGDI
IRAELDKKGEIVFRKMTLAKEPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dtur_1480 YP_002353368.1 ATPase VFG0079 Protein 0.0 55
Dtur_1480 YP_002353368.1 ATPase VFG0080 Protein 5e-149 51