Gene Information

Name : LMHCC_0099 (LMHCC_0099)
Accession : YP_002349075.1
Strain : Listeria monocytogenes HCC23
Genome accession: NC_011660
Putative virulence/resistance : Virulence
Product : alkaline phosphatase synthesis transcriptional regulatory proteinphoP
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 93432 - 94142 bp
Length : 711 bp
Strand : +
Note : -

DNA sequence : 
TTGGTAAAAATTCTTGTAGTTGATGATGAAGCTTCTATTGTTACGTTACTGCAATTTAATATTGAAAAAGCTGGGTTTGA
TGTGGTAACAGCAGAAGACGGCAGATCCGGATACGAACTCGCTTTGTCCGAAAAACCAGATTTAATTGTGCTTGATTTAA
TGCTTCCTGAGATGGACGGAATCGAAGTAACAAAAAAACTTCGCCAAGATAAAGTAAATGTGCCAATTTTAATGTTAACG
GCAAAAGATGAAGAATTAGATAAAATTATCGGGCTGGAACTTGGAGCAGATGACTATATGACTAAACCGTTTAGCCCAAG
AGAAGTAGTTGCAAGAATTAAAGCAATCTTGCGTCGAACAGAAGGAAAAGCCGAAATCATAGAAGAAATAACCGAAGATT
CGGAAGCTACGATATTAATTGGTGATTTGAAAATTTTGCCAGATAGTTATGAAGTGTATTTACAAGATGATTTACTTGAT
TTAACGCCAAAAGAATTTGAGTTATTGCTATTCTTGGCAAATCATCGCGGAAAAGTTTTTTCCAGAGATCAATTACTTGA
TACCGTGTGGAATTATGACTACGTTGGAGAAACCCGAATCGTAGACGTTCATGTCAGCCATTTGCGCGATAAAATTGAAC
TAGATACAAAACAACCTAAATACATCAAAACAATTCGTGGCTTTGGTTACAAAATGGAGAACGTGAAATAA

Protein sequence : 
MVKILVVDDEASIVTLLQFNIEKAGFDVVTAEDGRSGYELALSEKPDLIVLDLMLPEMDGIEVTKKLRQDKVNVPILMLT
AKDEELDKIIGLELGADDYMTKPFSPREVVARIKAILRRTEGKAEIIEEITEDSEATILIGDLKILPDSYEVYLQDDLLD
LTPKEFELLLFLANHRGKVFSRDQLLDTVWNYDYVGETRIVDVHVSHLRDKIELDTKQPKYIKTIRGFGYKMENVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-41 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-41 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP HE999704.1.gene2815. Protein 4e-106 98
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002745.1124361.p0 Protein 6e-68 60
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_009782.5559369.p0 Protein 6e-68 60
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002951.3237708.p0 Protein 6e-68 60
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_003923.1003749.p0 Protein 5e-68 60
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002758.1121668.p0 Protein 6e-68 60
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_009641.5332272.p0 Protein 6e-68 60
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_013450.8614421.p0 Protein 6e-68 60
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_007793.3914279.p0 Protein 6e-68 60
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002952.2859905.p0 Protein 8e-68 59
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_007622.3794472.p0 Protein 7e-68 59
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP AE016830.1.gene1681. Protein 2e-69 56
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_012469.1.7685629. Protein 1e-55 54
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_012469.1.7686381. Protein 1e-60 50
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP AE000516.2.gene3505. Protein 2e-38 44
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP AF162694.1.orf4.gene Protein 1e-37 43
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP001485.1.gene721.p Protein 2e-36 42
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP001918.1.gene5135. Protein 3e-29 42
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP004022.1.gene3215. Protein 9e-37 41
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP EU250284.1.orf4.gene Protein 4e-39 41
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP FJ349556.1.orf0.gene Protein 6e-42 41
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002695.1.915041.p Protein 2e-32 41
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP000647.1.gene4257. Protein 5e-33 41
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP000034.1.gene3834. Protein 2e-32 41
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP001138.1.gene4273. Protein 8e-33 41
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP BAC0533 Protein 5e-33 41
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP000034.1.gene3671. Protein 2e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP VFG1563 Protein 1e-41 42
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP VFG1702 Protein 9e-42 42
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP VFG1386 Protein 2e-39 42
LMHCC_0099 YP_002349075.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP VFG1389 Protein 3e-33 41