|
Name : LMHCC_0887 (LMHCC_0887) Accession : YP_002349850.1 Strain : Listeria monocytogenes HCC23 Genome accession: NC_011660 Putative virulence/resistance : Resistance Product : cystathionine beta-lyase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0626 EC number : - Position : 908537 - 909709 bp Length : 1173 bp Strand : + Note : catalyzes the formation of L-homocysteine from cystathionine DNA sequence : GTGGCTAATGAATATGCGCAAGATACGGCTGTGATTAAAGCGAGCCTCGGGATTGATAAAGAGACAGGTGCGCTTAATAC GCCAATTCATTTATCGTCTACTTTCCATCAGCATGACTTTGATAATTATCACGCTTATGATTATGCGAGAAGTGGGAACC CAACGAGAGAAAAAGTGGAACAAGCGATTGCGGAACTGGAAGGTGGTACGAATGGTTTTGCCTTTGCTAGTGGGATGGCG GCTGTTTCTGCGGCGCTCTTTACTCTTTCTAAGGGAGATCATTTTATCATTGCGAAAGATGTGTACGGCGGGACATTTCG TTTGGTGGAGCAAGTGTTGCCGCGGTTTGGGATTACGCATACTTTTGTTGATACGACAAATATTGACGAAGTTGCGAAGG CATTTCAAGCGAATACGAAATTGGTTTACTTGGAAACACCTTCTAATCCGTTGTTGCATGTGACAGATATTCGGACGGTT GCCAAACTTGCGAAAGCGAATGGGTGTTATACGTTTGTGGATAATACATTTTTGACGCCACTAATTCAAAAACCGTTAGA TTTGGGTGCGGACTTGGTTATCCACAGTGCGACGAAGTTTCTTGGCGGACATAGCGATATTTTGGCGGGGCTAATTGTCA CAAATAATCCTAGTTTGGCCGAAGCCGTTTACTTTTTGCAAAATTCGACTGGTGGGGTTCTTGGTGTGCAGGATTCGTGG TTGTTGTTGCGAGGACTTAAAACACTTTCTGTCCGGATGAAAGCTGGGACGGAGACGGCGGAGAAAATTGCGCTATTTTT AAATGCCGAACCAGATGTGGTGGCAGTGCATTATCCGGGGCTACCTTCTCATGCGGGTTATGACATTCAAGTGGAACAGG CGACAAGTGGCGGGGCTGTCTTATCGTTTGATCTTGGTAGTGAAGAAGCGGCGCGAGAACTAGTTACACATTTGGAATTG CCAGTGTTCTCTGTGAGTCTAGGTGCGGTTGAAAGCATTCTTTCTTACCCAGCTAAAATGTCTCATGCGGCTGTTCCGGA AGAGGAGCGTTTGGCGCAAGGAATTACGCCAGGATTATTACGTTTTTCAGCTGGACTGGAAGATGCCGATGATTTGATTG CTGATTTAAAACAAGCACTTTCTTTCATTAAGAAGGGAAGTGTTGCGAAATGA Protein sequence : MANEYAQDTAVIKASLGIDKETGALNTPIHLSSTFHQHDFDNYHAYDYARSGNPTREKVEQAIAELEGGTNGFAFASGMA AVSAALFTLSKGDHFIIAKDVYGGTFRLVEQVLPRFGITHTFVDTTNIDEVAKAFQANTKLVYLETPSNPLLHVTDIRTV AKLAKANGCYTFVDNTFLTPLIQKPLDLGADLVIHSATKFLGGHSDILAGLIVTNNPSLAEAVYFLQNSTGGVLGVQDSW LLLRGLKTLSVRMKAGTETAEKIALFLNAEPDVVAVHYPGLPSHAGYDIQVEQATSGGAVLSFDLGSEEAARELVTHLEL PVFSVSLGAVESILSYPAKMSHAAVPEEERLAQGITPGLLRFSAGLEDADDLIADLKQALSFIKKGSVAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 2e-76 | 49 |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 3e-75 | 49 |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 3e-75 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LMHCC_0887 | YP_002349850.1 | cystathionine beta-lyase | BAC0207 | Protein | 6e-55 | 43 |
